The bacteriome of otitis media with effusion: Does it originate from the adenoid?
| Autor: | Rıza Durmaz, Sema Karabudak, M. Tayyar Kalcioglu, A. Yasemin Gunduz, Oguz Ari |
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| Rok vydání: | 2019 |
| Předmět: |
Male
Eikenella corrodens Ear Middle Adenoid Microbiology Granulicatella elegans 03 medical and health sciences 0302 clinical medicine stomatognathic system Staphylococcus auricularis 030225 pediatrics RNA Ribosomal 16S otorhinolaryngologic diseases medicine Humans 030223 otorhinolaryngology Child biology business.industry Otitis Media with Effusion Microbiota Turicella otitidis Infant Bacteriome General Medicine biology.organism_classification stomatognathic diseases Otitis medicine.anatomical_structure Otorhinolaryngology Child Preschool Pediatrics Perinatology and Child Health Adenoids Female Sample collection Metagenomics medicine.symptom business |
| Zdroj: | International journal of pediatric otorhinolaryngology. 126 |
| ISSN: | 1872-8464 |
| Popis: | Objective The aim of this study was to evaluate the composition and the diversity of bacteriome in middle ear effusion (MEE) and adenoid specimens of pediatric patients having otitis media with effusion (OME). Materials and methods Sample collection from children with OME followed by next generation sequencing. Seventeen adenoid and 43 middle ear effusion specimens from 25 children having OME were evaluated. Microbiome analysis was performed via Ion 16S rRNA metagenomics kit. Results Twenty-two different bacterial species were identified from all of the samples analyzed. There were variations in the prevalence and relative abundance of the bacteriome observed between adenoid and MEE samples. MEE microbiome was significantly dominated by Alloicoccus otitis (44%), Turicella otitidis (6%), and Staphylococcus auricularis (3%). Whereas, Rothia mucilaginosa (39%), R. dentocariosa (11%), S. aureus (5%), Veillonella rogosae (2%), Granulicatella elegans (2%), Granulicatella adiacens (2%), Eikenella corrodens (1%), and Prevotella nanceiensis (1%) had significantly higher relative abundance in adenoid samples. Overall, there was no statistically significant difference in alpha diversity of MEE and adenoid samples, whereas adenoid samples constituted a cluster in the beta diversity graph. Conclusion Bacteriome of MEE is mostly dominated by A. otitis yet accompanied by other bacteria with lower relative abundances suggests that OME is likely to be a polymicrobial process. Despite similarities, significant differences in relative abundances of several predominant species between bacteriome in the MEE and adenoid put the theory that OME in children is originated from the adenoids under question. |
| Databáze: | OpenAIRE |
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