| Autor: |
Lukáš Novák, Zubáčová, Zuzana, Karnkowska, Anna, Kolisko, Martin, Miluše Hroudová, Stairs, Courtney, Simpson, Alastair, Keeling, Patrick, Roger, Andrew, Čepička, Ivan, Hampl, Vladimír |
| Rok vydání: |
2016 |
| DOI: |
10.6084/m9.figshare.c.3604916_d3.v1 |
| Popis: |
Phylogenetic tree of OTC sequences. The tree based on a 242 positions long protein alignment of 444 sequences was constructed in RAxML using the LG4X + Γ model of substitution. Eukaryotic taxa are highlighted in different colors according to the major group they belong to. The color code is the same as in Fig. 1. The values at nodes represent RAxML bootstrap support/IQ-TREE bootstrap support. Only values above 50 % are shown. Black circles indicate support of 100 %/100 %. Species with multiple sequences included: Alexandrium tamarense 1 – CAMPEP 0186340278; Alexandrium tamarense 2 – CAMPEP 0186191854; Alexandrium tamarense 3 – CAMPEP 0186247540; Durinskia baltica 1 – CAMPEP 0200033980; Durinskia baltica 2 – CAMPEP 0200081736; Euglena gracilis 1 – c20598 g1 i1; Euglena gracilis 2 – c34673 g1 i6; Eutreptiella gymnastica-like 1 – CAMPEP 0200420840; Eutreptiella gymnastica-like 2 – CAMPEP 0200409666; Karenia brevis 1 – CAMPEP 0188881430; Karenia brevis 2 – CAMPEP 0188950444; Karlodinium micrum 1 – CAMPEP 0200795676; Karlodinium micrum 2 – CAMPEP 0200767534. The tree is rooted with sequences of bacterial aspartate carbamoyltransferase (ATC; EC 2.1.3.2). (PDF 506 kb) |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
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