Small-Molecule Inhibitors of the Programmed Cell Death-1/Programmed Death-Ligand 1 (PD-1/PD-L1) Interaction via Transiently Induced Protein States and Dimerization of PD-L1

Autor: Przemyslaw Grudnik, Lukasz Skalniak, Bogdan Musielak, Katarzyna Magiera, Grzegorz Dubin, Tad A. Holak, Krzysztof M. Zak, Ricarda Törner, Alexander Dömling, Katarzyna Guzik
Přispěvatelé: Drug Design, Medicinal Chemistry and Bioanalysis (MCB)
Rok vydání: 2017
Předmět:
0301 basic medicine
4 benzodioxin 6 yl) 2 methylphenyl]methanol
crystallization
medicine.medical_treatment
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2 hydroxy 5 methylbenzaldehyde
2
6 dimethoxy 4 [(2 methyl 3 phenylphenyl)methoxy]benzaldehyde

Programmed Cell Death 1 Receptor
6 dimethoxy 4 [(2 methyl 3 phenylphenyl)methoxy]phenyl]methyl]amino] 3 methylbutan 1 ol hydrochloride
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2
IC50
X ray analysis
Crystallography
X-Ray

B7-H1 Antigen
1 [[3 bromo 4 [(2 methyl 3 phenylphenyl)methoxy]phenyl]methyl]piperidine 2 carboxylic acid
0302 clinical medicine
Protein structure
Cancer immunotherapy
6 dimethoxy 4 [(2 methyl 3 phenylphenyl)methoxy]benzaldehyde
4 benzodioxin 6 yl) 2methylphenyl]methoxy] 2
Drug Discovery
Protein Interaction Maps
drug determination
3 [4 chloro 5 [[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2 formylphenoxymethyl]benzonitrile

dimerization
biology
4 [[[4 [[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2methylphenyl]methoxy] 2
5 difluorophenyl]methyl]amino] 3 hydroxybutanoic acid hydrochloride

Chemistry
heteronuclear multiple quantum coherence
article
Nuclear magnetic resonance spectroscopy
5 difluorobenzaldehyde
protein function
Ligand (biochemistry)
Small molecule
unclassified drug
2 methoxy 6 [(2 methyl 3 phenylphenyl)methoxy]pyridine 3 carbaldehyde
Molecular Docking Simulation
030220 oncology & carcinogenesis
[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2 methylphenyl]methanol

Molecular Medicine
[3 (2
medicine.drug_class
Stereochemistry
3 dihydro 1
2 [[[2 [(3 cyanophenyl)methoxy] 4 [[3 (2
4 [[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2
5 difluorobenzaldehyde

4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2 hydroxybenzaldehyde
3 [4 chloro 5 [[3 (2
Monoclonal antibody
oligomerization
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 5 methylphenyl] methyl]amino] 3 hydroxypropanoic acid hydrochloride
Small Molecule Libraries
3 [5 [[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2 formyl 4 methylphenoxymethyl]benzonitrile

03 medical and health sciences
3 bromo 4 [(2 methyl 3 phenylphenyl)methoxy]benzaldehyde
PD-L1
n [2 [[[2 methoxy 6 [(2 methyl 3 phenylphenyl)methoxy]pyridin 3 yl]methyl]amino]ethyl]acetamide hydrochloride
5 chloro 4 [[3 (2
medicine
3 [5 [[3 (2
(2 methyl 3 biphenylyl)methanol
Humans
2 [[[2
human
protein interaction
protein structure
protein expression
hydrophobicity
nuclear magnetic resonance spectroscopy
1 [[5 chloro 2 [(3 cyanophenyl)methoxy] 4 [[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2 methylphenyl]methoxy]phenyl] methyl] 4 hydroxypyrrolidine 2 carboxylic acid hydrochloride

4 benzodioxin 6 yl) 2 methylphenyl]methoxy]phenyl] methyl] 4 hydroxypyrrolidine 2 carboxylic acid hydrochloride
cancer immunotherapy
2 [[[2
6 dimethoxy 4 [(2 methyl 3 phenylphenyl)methoxy]phenyl]methyl]amino] 3 methylbutan 1 ol hydrochloride

5 difluorophenyl]methyl]amino] 3 hydroxybutanoic acid hydrochloride
1 [[5 chloro 2 [(3 cyanophenyl)methoxy] 4 [[3 (2
Immune checkpoint
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2 formylphenoxymethyl]benzonitrile
programmed death 1 ligand 1
drug structure
030104 developmental biology
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2 formyl 4 methylphenoxymethyl]benzonitrile
protein inhibitor
2 [[[2 [(3 cyanophenyl)methoxy] 4 [[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 5 methylphenyl] methyl]amino] 3 hydroxypropanoic acid hydrochloride

5 chloro 4 [[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2 hydroxybenzaldehyde

4 [[3 (2
biology.protein
drug synthesis
immunomodulating agent
4 [[[4 [[3 (2
Protein Multimerization
4 [[3 (2
3 dihydro 1
4 benzodioxin 6 yl) 2 methylphenyl]methoxy] 2 hydroxy 5 methylbenzaldehyde
Zdroj: Journal of Medicinal Chemistry, 60(13), 5857-5867. AMER CHEMICAL SOC
ISSN: 1520-4804
0022-2623
Popis: Blockade of the PD-1/PD-L1 immune checkpoint pathway with monoclonal antibodies has provided significant advances in cancer treatment. The antibody-based immunotherapies carry a number of disadvantages such as the high cost of the antibodies, their limited half-life, and immunogenicity. Development of small-molecule PD-1/PD-L1 inhibitors that could overcome these drawbacks is slow because of the incomplete structural information for this pathway. The first chemical PD-1/PD-L1 inhibitors have been recently disclosed by Bristol-Myers Squibb. Here we present NMR and X-ray characterization for the two classes of these inhibitors. The X-ray structures of the PD-L1/inhibitor complexes reveal one inhibitor molecule located at the center of the PD-L1 homodimer, filling a deep hydrophobic channel-like pocket between two PD-L1 molecules. Derivatives of (2-methyl-3-biphenylyl)methanol exhibit the structures capped on one side of the channel, whereas the compounds based on [3-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methylphenyl]methanol induce an enlarged interaction interface that results in the open "face-back" tunnel through the PD-L1 dimer.
Databáze: OpenAIRE