The origin identification method for crude drugs derived from arthropods and annelids using molecular biological techniques
Autor: | Masaaki Hara, Katsumi Yoneyama, Hiroaki Nakanishi, Kazuyuki Saito, Aya Takada |
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Rok vydání: | 2019 |
Předmět: |
Cell Extracts
Annelida Crude drug Polymerase Chain Reaction 01 natural sciences law.invention Electron Transport Complex IV symbols.namesake chemistry.chemical_compound law RNA Ribosomal 16S Animals Cytochrome c oxidase Arthropods Gene Phylogeny Polymerase chain reaction Genetics Sanger sequencing Base Sequence biology 010405 organic chemistry DNA Sequence Analysis DNA Ribosomal RNA 16S ribosomal RNA 0104 chemical sciences 010404 medicinal & biomolecular chemistry chemistry RNA Ribosomal biology.protein symbols Molecular Medicine Sequence Alignment |
Zdroj: | Journal of Natural Medicines. 74:275-281 |
ISSN: | 1861-0293 1340-3443 |
DOI: | 10.1007/s11418-019-01360-1 |
Popis: | We evaluated whether the origins of crude drugs derived from arthropods and annelids could be identified using molecular biological techniques. DNA was extracted from 20 crude drugs prepared from different animals using a commercial kit with added phenol treatment. The target regions used to identify origin were the mitochondrial 16S ribosomal RNA (rRNA), 12S rRNA, and cytochrome oxidase subunit I (COI) gene regions. Extracted DNA was amplified by polymerase chain reaction, and then sequenced by the Sanger method. The aligned sequences were compared with all available sequences using BLAST to estimate the origins of the crude drugs. The origin of crude drugs used in this study could be estimated using this method. The COI region was the best for identifying origin among three regions examined, based on the success rate of PCR amplification and analysis. Moreover, the 12S rRNA region was also useful for origin identification, with the exception of the earthworm. However, the origin of some crude drugs could not be strictly identified due to matches to various species in all three regions. One likely cause was that the species of origin of a crude drug has not been registered in DNA databases. We found that even the same crude drug from the same pharmaceutical company had different origins by production lot or import source country. Therefore, this method is useful not only for DNA-based origin identification but also quality control of production lots. |
Databáze: | OpenAIRE |
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