Genome annotation of a Saccharomyces sp. lager brewer's yeast
| Autor: | Jan-Maarten A. Geertman, Ramiro Elizondo-Gonzalez, Marcel van den Broek, Luis J. Galán-Wong, Patricia Marcela De León-Medina, Rocio Ortiz-Lopez, Luis Cástulo Damas-Buenrostro, Benito Pereyra-Alférez |
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| Jazyk: | angličtina |
| Rok vydání: | 2016 |
| Předmět: |
0301 basic medicine
lcsh:QH426-470 Lager yeast Lager beer 030106 microbiology Saccharomyces cerevisiae Biochemistry Genome 03 medical and health sciences Genetics Gene Genome size Saccharomyces pastorianus biology Saccharomyces eubayanus Regular Article Genome project biology.organism_classification Yeast Hybrid lcsh:Genetics 030104 developmental biology Molecular Medicine Biotechnology |
| Zdroj: | Genomics Data, Vol 9, Iss C, Pp 25-29 (2016) Genomics Data |
| ISSN: | 2213-5960 |
| Popis: | The genome of lager brewer's yeast is a hybrid, with Saccharomyces eubayanus and Saccharomyces cerevisiae as sub-genomes. Due to their specific use in the beer industry, relatively little information is available. The genome of brewing yeast was sequenced and annotated in this study. We obtained a genome size of 22.7Mbp that consisted of 133 scaffolds, with 65 scaffolds larger than 10kbp. With respect to the annotation, 9939 genes were obtained, and when they were submitted to a local alignment, we found that 53.93% of these genes corresponded to S. cerevisiae, while another 42.86% originated from S. eubayanus. Our results confirm that our strain is a hybrid of at least two different genomes. |
| Databáze: | OpenAIRE |
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