Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI943
| Autor: | A. Christine Munk, Lynne Goodwin, Mohamed Ninawi, Karen W. Davenport, Hazuki Teshima, Vanessa Melino, Lambert Bräu, Rui Tian, Nikos C. Kyrpides, Wayne Reeve, Patrick S. G. Chain, Sofie E. De Meyer, Yan Xu, Elizabeth Drew, Ross Ballard, Hajnalka E. Daligault, Wei Gu, Tracy Erkkila |
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| Jazyk: | angličtina |
| Rok vydání: | 2013 |
| Předmět: |
SOIL RHIZOBIA
Root nodule PREDICTION RNA GENES medicine.disease_cause rhizobia Genome ANNOTATION Rhizobium leguminosarum ACID-TOLERANCE Rhizobia Botany Genetics medicine Alphaproteobacteria Whole genome sequencing biology Strain (chemistry) SYMBIOTIC EFFECTIVENESS Biology and Life Sciences food and beverages PERFORMANCE biology.organism_classification REVISION Short Genome Reports PROSPECTS nitrogen fixation Nitrogen fixation root-nodule bacteria N-2 FIXATION |
| Zdroj: | Standards in Genomic Sciences STANDARDS IN GENOMIC SCIENCES |
| ISSN: | 1944-3277 |
| Popis: | Rhizobium leguminosarum bv. trifolii SRDI943 (strain syn. V2-2) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Trifolium michelianum Savi cv. Paradana that had been grown in soil collected from a mixed pasture in Victoria, Australia. This isolate was found to have a broad clover host range but was sub-optimal for nitrogen fixation with T. subterraneum (fixing 20-54% of reference inoculant strain WSM1325) and was found to be totally ineffective with the clover species T. polymorphum and T. pratense. Here we describe the features of R. leguminosarum bv. trifolii strain SRDI943, together with genome sequence information and annotation. The 7,412,387 bp high-quality-draft genome is arranged into 5 scaffolds of 5 contigs, contains 7,317 protein-coding genes and 89 RNA-only encoding genes, and is one of 100 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project. |
| Databáze: | OpenAIRE |
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