Peculiar Evolutionary History of miR390-Guided TAS3-Like Genes in Land Plants
| Autor: | Lydmila V. Ozerova, Sergey Y. Morozov, D. V. Goryunov, Maria S. Krasnikova, Andrey G. Solovyev, A. V. Troitsky |
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| Jazyk: | angličtina |
| Rok vydání: | 2013 |
| Předmět: |
Article Subject
DNA Plant lcsh:Medicine Physcomitrella patens Genes Plant Polymerase Chain Reaction lcsh:Technology General Biochemistry Genetics and Molecular Biology Bryopsida Evolution Molecular Marchantia polymorpha Phylogenetics lcsh:Science Phylogeny General Environmental Science DNA Primers Plant evolution Genetics biology Base Sequence lcsh:T Sphagnopsida lcsh:R food and beverages General Medicine biology.organism_classification genomic DNA MicroRNAs lcsh:Q Marchantiophyta Research Article |
| Zdroj: | The Scientific World Journal, Vol 2013 (2013) The Scientific World Journal |
| Popis: | PCR-based approach was used as a phylogenetic profiling tool to probe genomic DNA samples from representatives of evolutionary distant moss taxa, namely, classes Bryopsida, Tetraphidopsida, Polytrichopsida, Andreaeopsida, and Sphagnopsida. We found relatives of allPhyscomitrella patensmiR390 and TAS3-like loci in these plant taxa excluding Sphagnopsida. Importantly, cloning and sequencing ofMarchantia polymorphagenomic DNA showed miR390 and TAS3-like sequences which were also found among genomic reads ofM. polymorphaat NCBI database. Our data suggest that the ancient plant miR390-dependent TAS molecular machinery firstly evolved to target AP2-like mRNAs in Marchantiophyta and only then both ARF- and AP2-specific mRNAs in mosses. The presented analysis shows that moss TAS3 families may undergone losses of tasiAP2 sites during evolution toward ferns and seed plants. These data confirm that miR390-guided genes coding for ARF- and AP2-specific ta-siRNAs have been gradually changed during land plant evolution. |
| Databáze: | OpenAIRE |
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