Additional file 12 of Investigating the impact of reference assembly choice on genomic analyses in a cattle breed

Autor: Audald Lloret-Villas, Bhati, Meenu, Kadri, Naveen Kumar, Fries, Ruedi, Pausch, Hubert
Rok vydání: 2021
DOI: 10.6084/m9.figshare.14623399.v1
Popis: Additional file 12 Figure S4: Selective sweeps on chromosome 13. Chromosome 13 region in ARS-UCD1.2 from 10,501,688 - 12,506,844 Mb and corresponding region on UOA_Angus_1 between 71,231,671 - 73,018,009 Mb with highlighted six selective sweep region from 11.5 Mb to 12 Mb. (A) Dot plot between the two assemblies, (B) SNP density per Kb (red line represents the average SNP density/chromosome), (C) Standardized coverage per 0.5 Kb, (D) Alternate allele frequency of each SNP (each dot is per SNP).
Databáze: OpenAIRE