Genome size of Balkan flora: a database (GeSDaBaF) and C-values for 51 taxa of which 46 are novel
| Autor: | Vladimir Stevanović, Marija Edita Šolić, Nicolas Valentin, Aldin Boškailo, Joan Vallès, Edina Muratović, N. Bašić, Michaël Bourge, Fatima Pustahija, Teresa Garnatje, Sonja Siljak-Yakovlev, Faruk Bogunić |
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| Přispěvatelé: | Institut de Biologie Intégrative de la Cellule (I2BC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Cytométrie (CYTO), Département Plateforme (PF I2BC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Intégrative de la Cellule (I2BC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) |
| Jazyk: | angličtina |
| Rok vydání: | 2020 |
| Předmět: |
0106 biological sciences
Genome size Flora 1st assessments Balkan region [SDV]Life Sciences [q-bio] online database Ploidy level l. asteraceae Plant Science Subspecies computer.software_genre 010603 evolutionary biology 01 natural sciences 2C DNA value constraint hypothesis Taxonomic rank Flow cytometry genus ramonda Ecology Evolution Behavior and Systematics Orchidaceae biology Database plants Monoploid genome size 15. Life on land biology.organism_classification Biodiversity hotspot chromosome-numbers Plant ecology Taxon postglacial colonization routes nuclear-dna content computer 010606 plant biology & botany |
| Zdroj: | Plant Systematics and Evolution Plant Systematics and Evolution, 2020, 306 (2), pp.UNSP 40. ⟨10.1007/s00606-020-01670-y⟩ Digital.CSIC. Repositorio Institucional del CSIC instname |
| DOI: | 10.1007/s00606-020-01670-y⟩ |
| Popis: | Artículo de 15 páginas con fotografías de campo de especies analizadas, tablas de localización geográfica y datos de genoma, y mapa de distribución geográfica de especies The Balkan Peninsula is one of the 250 centres for plant diversity identified in the World, and one of the major biodiversity hotspot plant areas in Europe. Balkan flora has been well studied at the morphological, phytogeographical and taxonomic levels, but a scarce attention had been paid to genome size. This work consists of two distinct parts. The first concerned the contribution for 2C values of Balkan plants, taking into account mainly the plants with unknown genome size. On the one hand, 54 accessions of 51 species or infraspecific taxa belonging to 43 genera and 25 families were studied for their nuclear DNA amount. Among the obtained values, 46 are novel (four for genera, 31 for species, 10 for subspecies and one for a hybrid). The novelties represent the 6.43% of the 731 taxa with nuclear DNA amount assessed in the Balkans to date. Three taxa presented two ploidy levels in different populations. Partial endoreplication has been detected in Dactylorhiza cordigera subsp. bosniaca. This observation brings a new addition to the list of partial endoreplication cases in Orchidaceae, a family which, with Brassicaceae, shows this phenomenon most frequently. On the other hand, we compiled all bibliographic data concerning C-values for plants of the Balkan region, aiming to establish a genome size database, which is available online and will be regularly updated. We presented some numeric analyses on the 1013 accessions and 731 taxa for which data are currently accumulated and concluded with a discussion on the usefulness of such a database. We thank the Laboratoire d’Ecologie, Systématique et Evolution (UMR CNRS 8079) for financial support of genome size estimation. Introduction Materials and methods - Plant material - Sample preparation and flow cytometry analysis Results and discussion - New genome size assessment for 51 Balkan taxa - The genome size database of the Balkan flora: general descriptive results - A lesson from the database: interest of the study of several populations per taxon - Compliance with ethical standards Information on Electronic supplementary material References Affiliations |
| Databáze: | OpenAIRE |
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