Quantitative image analysis of microbial communities with BiofilmQ

Autor: Janne G. Thöming, Anna Dragoš, Daniel K. H. Rode, Victor Sourjik, Lucia Vidakovic, Knut Drescher, Niklas Netter, Susanne Häussler, Praveen K. Singh, Ákos T. Kovács, Miriam Bayer, Sanika Vaidya, Olga Lamprecht, Carey D. Nadell, Fitnat H. Yildiz, Francisco Díaz-Pascual, Eric Jelli, Hannah Jeckel, Jiunn C. N. Fong, Raimo Hartmann
Přispěvatelé: HZI,Helmholtz-Zentrum für Infektionsforschung GmbH, Inhoffenstr. 7,38124 Braunschweig, Germany.
Rok vydání: 2021
Předmět:
Zdroj: Nature microbiology
England
Nature Microbiology
Hartmann, R, Jeckel, H, Jelli, E, Singh, P K, Vaidya, S, Bayer, M, Rode, D K H, Vidakovic, L, Díaz-Pascual, F, Fong, J C N, Dragoš, A, Lamprecht, O, Thöming, J G, Netter, N, Häussler, S, Nadell, C D, Sourjik, V, Kovács, Á T, Yildiz, F H & Drescher, K 2021, ' Quantitative image analysis of microbial communities with BiofilmQ ', Nature Microbiology, vol. 6, pp. 151-156 . https://doi.org/10.1038/s41564-020-00817-4
ISSN: 2058-5276
DOI: 10.1038/s41564-020-00817-4
Popis: Biofilms are microbial communities that represent a highly abundant form of microbial life on Earth. Inside biofilms, phenotypic and genotypic variations occur in three-dimensional space and time; microscopy and quantitative image analysis are therefore crucial for elucidating their functions. Here, we present BiofilmQ—a comprehensive image cytometry software tool for the automated and high-throughput quantification, analysis and visualization of numerous biofilm-internal and whole-biofilm properties in three-dimensional space and time.
BiofilmQ is an image cytometry software tool that enables the visualization, quantification and analysis of biofilm properties, providing insights into their structure and function.
Databáze: OpenAIRE
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