BioStructures.jl: read, write and manipulate macromolecular structures in Julia
| Autor: | Joel Selvaraj, Ben J. Ward, Joe G Greener |
|---|---|
| Rok vydání: | 2020 |
| Předmět: |
Statistics and Probability
Source code Computer science media_common.quotation_subject computer.software_genre Biochemistry 03 medical and health sciences Structural bioinformatics Software Representation (mathematics) Molecular Biology 030304 developmental biology media_common 0303 health sciences business.industry Programming language 030302 biochemistry & molecular biology Computational Biology computer.file_format Protein Data Bank Object (computer science) Computer Science Applications Computational Mathematics Computational Theory and Mathematics Programming Languages business computer Macromolecule |
| Zdroj: | Bioinformatics (Oxford, England). 36(14) |
| ISSN: | 1367-4811 |
| Popis: | Summary Robust, flexible and fast software to read, write and manipulate macromolecular structures is a prerequisite for productively doing structural bioinformatics. We present BioStructures.jl, the first dedicated package in the Julia programming language for dealing with macromolecular structures and the Protein Data Bank. BioStructures.jl builds on the lessons learned with similar packages to provide a large feature set, a flexible object representation and high performance. Availability and implementation BioStructures.jl is freely available under the MIT license. Source code and documentation are available at https://github.com/BioJulia/BioStructures.jl. BioStructures.jl is compatible with Julia versions 0.6 and later and is system-independent. Contact j.greener@ucl.ac.uk |
| Databáze: | OpenAIRE |
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