Structure and Function of Viral Deubiquitinating Enzymes

Autor: Robert C. M. Knaap, Ben A. Bailey-Elkin, Brian L. Mark, Marjolein Kikkert
Rok vydání: 2017
Předmět:
0301 basic medicine
ssRNA
single-stranded RNA

eIF4G
eukaryotic translation initiation factor 4 gamma

OTU
ovarian tumor protease

CoV
coronavirus

ERVV
Erve virus

BL2
blocking-loop 2

RIG-I
retinoic acid-inducible gene I

IRF
IFN regulatory factor

innate immune evasion
Deubiquitinating enzyme
cGAS
cyclic-GMP-AMP synthase

PEDV
porcine epidemic diarrhea virus

Ubiquitin
Structural Biology
CCHFV
Crimean-Congo hemorrhagic fever virus

TRAF
TNF receptor-associated factor

MERS-CoV
Middle East respiratory syndrome CoV

viral deubiquitinating enzyme
Ub
ubiquitin

MCMV
murine cytomegalovirus

TNF
tumor necrosis factor

Deubiquitinating Enzymes
RIG-I
ISG15
interferon-stimulated gene 15

Cell biology
DUB
deubiquitinating enzyme

LDV
lactate dehydrogenase-elevating virus

TYMV
turnip yellow mosaic virus

Host-Pathogen Interactions
Viruses
MAVS
mitochondrial antiviral signaling protein

EBV
Epstein–Barr virus

MDA5
melanoma differentiation factor 5

HSV-1
herpes simplex virus 1

IRF3
IFN regulatory factor 3

SARS-CoV
severe acute respiratory syndrome CoV

PRR
pattern-recognition receptor

papain-like protease
UbV
Ub variant

Biology
TF
trans frame

EAV
equine arteritis virus

Article
PLP
papain-like protease

03 medical and health sciences
Viral Proteins
Immune system
STING
stimulator of IFN genes

ORF
open reading frame

ubiquitin
ISG
interferon-stimulated gene

IBV
avian infectious bronchitis virus

UBL
Ub-like

IFN
interferon

SARS
severe acute respiratory syndrome

CRL
Cullin-RING Ub ligase

AMC
7-amino-4-methylcoumarin

TLR
toll-like receptor

Molecular Biology
MHV
mouse hepatitis virus

RR
ribonucleotide reductase

HAUSP
herpesvirus-associated USP

NSDV
Nairobi sheep disease virus

Immune Evasion
KSV
Kaposi's sarcoma virus

AdV
adenovirus

HCMV
human cytomegalovirus

nsps
non-structural proteins

Innate immune system
030102 biochemistry & molecular biology
NEMO
NF-κB essential modulator

USP
Ub-specific protease

MERS
Middle East respiratory syndrome

DUGV
Dugbe virus

SHFV
simian hemorrhagic fever virus

cGAMP
cyclic-GMP-AMP

MDV
Marek's disease virus

ISG15
Virology
TGEV
porcine transmissible gastroenteritis

Protein ubiquitination
Immunity
Innate

TANK
TRAF family member-associated activator

PRRSV
porcine reproductive and respiratory syndrome virus

030104 developmental biology
Viral replication
TBK1
TANK-binding kinase 1

biology.protein
FMDV
foot-and-mouth disease virus

EVG
Enterovirus species G
Zdroj: Journal of Molecular Biology
Journal of Molecular Biology, 429(22), 3441-3470
ISSN: 1089-8638
Popis: Post-translational modification of cellular proteins by ubiquitin regulates numerous cellular processes, including innate and adaptive immune responses. Ubiquitin-mediated control over these processes can be reversed by cellular deubiquitinating enzymes (DUBs), which remove ubiquitin from cellular targets and depolymerize polyubiquitin chains. The importance of protein ubiquitination to host immunity has been underscored by the discovery of viruses that encode proteases with deubiquitinating activity, many of which have been demonstrated to actively corrupt cellular ubiquitin-dependent processes to suppress innate antiviral responses and promote viral replication. DUBs have now been identified in diverse viral lineages, and their characterization is providing valuable insights into virus biology and the role of the ubiquitin system in host antiviral mechanisms. Here, we provide an overview of the structural biology of these fascinating viral enzymes and their role innate immune evasion and viral replication.
Graphical Abstract Image 1
Highlights • Activation of host innate antiviral responses is largely ubiquitin-dependent. • Virus-encoded DUBs can modulate innate immune signaling. • Analysis of structurally diverse DUBs of DNA and RNA viruses. • Viral DUBs are critical for virus replication and pathogenesis. • Therapeutic strategies and vaccination approaches targeting viral DUBs.
Databáze: OpenAIRE