Complete genome sequence of Mycobacterium sp. strain (Spyr1) and reclassification to Mycobacterium gilvum Spyr1
| Autor: | Konstantinos Liolios, Christos C. Ouzounis, Lynne Goodwin, Kurt LaButti, Constantin Drainas, Tanja Woyke, Aristeidis Kallimanis, Athanasios Velentzas, Kostantinos Mavromatis, Nikos C. Kyrpides, Anna I. Koukkou, Angelos Perisynakis, Eugenia Karabika, Natalia Ivanova, Alla Lapidus |
|---|---|
| Rok vydání: | 2011 |
| Předmět: |
Fluoranthene
Genetics Whole genome sequencing 0303 health sciences Mycobacterium gilvum biology 030306 microbiology biology.organism_classification Genome PAH biodegradation Short Genome Reports Microbiology 03 medical and health sciences chemistry.chemical_compound Complete sequence Plasmid chemistry Energy source pyrene degradation 030304 developmental biology Mycobacterium |
| Zdroj: | Standards in Genomic Sciences |
| ISSN: | 1944-3277 |
| Popis: | Mycobacterium sp.Spyr1 is a newly isolated strain that occurs in a creosote contaminated site in Greece. It was isolated by an enrichment method using pyrene as sole carbon and energy source and is capable of degrading a wide range of PAH substrates including pyrene, fluoranthene, fluorene, anthracene and acenapthene. Here we describe the genomic features of this organism, together with the complete sequence and annotation. The genome consists of a 5,547,747 bp chromosome and two plasmids, a larger and a smaller one with sizes of 211,864 and 23,681 bp, respectively. In total, 5,588 genes were predicted and annotated. |
| Databáze: | OpenAIRE |
| Externí odkaz: |
|
Full text from SpringerLink