Additional file 5 of A multilocus sequence analysis scheme for characterization of Flavobacterium columnare isolates

Autor: Roghaieh Ashrafi, Pulkkinen, Katja, Lotta-Riina Sundberg, Pekkala, Nina, Ketola, Tarmo
Rok vydání: 2019
DOI: 10.6084/m9.figshare.10040006
Popis: Phylogenetic tree based on the 16Â s rDNA sequence data obtained from the representatives of Finnish F .columnare genotypes (A-H) studied in this study and other F .columnare sequences obtained from the GenBank. The tree was constructed by a UPGMA clustering method with a resampling of 1,000 bootstrap replicates and the Jukes Cantor model. Two strains representative of each ARISA genotype/MLSA cluster studied in this study were used for tree construction (identical sequences removed for clarity of representation). (PDF 191 kb)
Databáze: OpenAIRE