DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation

Autor: Valentin Iglesias, Vasilis J. Promponas, Alexander Miguel Monzon, Konstantinos D. Tsirigos, Juliet F Nilsson, Attila Mészáros, Samuel Peña-Díaz, Edoardo Salladini, Silvio C. E. Tosatto, Peter Tompa, Zsuzsanna Dosztányi, Zsofia E. Kalman, Norman E. Davey, Christos A. Ouzounis, Nazanin Farahi, Giovanni Minervini, Martín N. Salas, Arne Elofsson, Mátyás Pajkos, Julia Marchetti, Maria Cristina Aspromonte, Elena Papaleo, Sonia Longhi, Juliana Glavina, Anastasia Chasapi, Federica Quaglia, Gabriele Pozzati, Tamás Szaniszló, Rita Pancsa, Damiano Piovesan, András Hatos, Aditi Shenoy, Bálint Mészáros, Suvarna Nadendla, Javier Iserte, Pascale Gaudet, Lucía B. Chemes, Emanuela Leonardi, Jaime Santos, Radoslav Davidovic, Michelle G. Giglio, Gábor Erdős, Eva Schad, Emiliano Maiani, Salvador Ventura, Pedro Pereira, László Dobson, Nevena Veljkovic, Jordi Pujols, Claudio Bassot, Alma Carolina Sanchez Rocha, Veronika Ács, Cristina Marino-Buslje, Erzsébet Fichó, Gustavo Parisi, Sandra Macedo-Ribeiro, Nicolas Palopoli, Luciana Rodriguez Sawicki, Marian Novotný, Tamas Lazar, Matteo Lambrughi
Přispěvatelé: Universita degli Studi di Padova, European Molecular Biology Laboratory [Heidelberg] (EMBL), Research Centre for Natural Sciences, Hungarian Academy of Sciences (MTA), Universidad Nacional de San Martin (UNSAM), Eötvös Loránd University (ELTE), Vrije Universiteit Brussel (VUB), Universitat Autònoma de Barcelona (UAB), Stockholm University, Centre for Research & Technology Hellas, Chester Beatty Laboratories, University of Belgrade [Belgrade], Swiss Institute of Bioinformatics [Genève] (SIB), University of Maryland School of Medicine, University of Maryland System, Fundación Instituto Leloir [Buenos Aires], Pázmány Péter Catholic University, Danish Cancer Society Research Center, Architecture et fonction des macromolécules biologiques (AFMB), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Universidade do Porto, Universidad Nacional de Quilmes (UNQ), Faculty of Science, Aristotle University of Thessaloniki, Technical University of Denmark [Lyngby] (DTU), University of Cyprus (UCY), Charles University [Prague] (CU), Wellcome Trust Genome Campus, European Project: 778247,IDPfun, Department of Bio-engineering Sciences, Structural Biology Brussels, Università degli Studi di Padova = University of Padua (Unipd), Centre for Research and Technology Hellas (CERTH), Universidade do Porto = University of Porto, Danmarks Tekniske Universitet = Technical University of Denmark (DTU), University of Cyprus [Nicosia] (UCY), Italian Ministry of University and Research (MIUR), PRIN 2017 under grant agreement no. 2017483NH8., Ukupan broj autora: 61
Jazyk: angličtina
Předmět:
Zdroj: Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2021, ⟨10.1093/nar/gkab1082⟩
Nucleic Acids Research, 2022, 50 (D1), pp.D480-D487. ⟨10.1093/nar/gkab1082⟩
Nucleic acids research
Nuclei Acids Research
Quaglia, F, Mészáros, B, Salladini, E, Hatos, A, Pancsa, R, Chemes, L B, Pajkos, M, Lazar, T, Peña-Díaz, S, Santos, J, Ács, V, Farahi, N, Fichó, E, Aspromonte, M C, Bassot, C, Chasapi, A, Davey, N E, Davidović, R, Dobson, L, Elofsson, A, Erdős, G, Gaudet, P, Giglio, M, Glavina, J, Iserte, J, Iglesias, V, Kálmán, Z, Lambrughi, M, Leonardi, E, Longhi, S, Macedo-Ribeiro, S, Maiani, E, Marchetti, J, Marino-Buslje, C, Mészáros, A, Monzon, A M, Minervini, G, Nadendla, S, Nilsson, J F, Novotný, M, Ouzounis, C A, Palopoli, N, Papaleo, E, Pereira, P J B, Pozzati, G, Promponas, V J, Pujols, J, Rocha, A C S, Salas, M, Sawicki, L R, Schad, E, Shenoy, A, Szaniszló, T, Tsirigos, K D, Veljkovic, N, Parisi, G, Ventura, S, Dosztányi, Z, Tompa, P, Tosatto, S C E & Piovesan, D 2022, ' DisProt in 2022 : improved quality and accessibility of protein intrinsic disorder annotation ', Nucleic Acids Research, vol. 50, no. D1, pp. D480–D487 . https://doi.org/10.1093/nar/gkab1082
ISSN: 1362-4962
0305-1048
DOI: 10.1093/nar/gkab1082
Popis: The Database of Intrinsically Disordered Proteins (DisProt, URL: https://disprot.org) is the major repository of manually curated annotations of intrinsically disordered proteins and regions from the literature. We report here recent updates of DisProt version 9, including a restyled web interface, refactored Intrinsically Disordered Proteins Ontology (IDPO), improvements in the curation process and significant content growth of around 30%. Higher quality and consistency of annotations is provided by a newly implemented reviewing process and training of curators. The increased curation capacity is fostered by the integration of DisProt with APICURON, a dedicated resource for the proper attribution and recognition of biocuration efforts. Better interoperability is provided through the adoption of the Minimum Information About Disorder (MIADE) standard, an active collaboration with the Gene Ontology (GO) and Evidence and Conclusion Ontology (ECO) consortia and the support of the ELIXIR infrastructure. © The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research.
Databáze: OpenAIRE
Externí odkaz: