Site directed mutagenesis as a precision tool to enable synthetic biology with engineered modular polyketide synthases

Autor: Erin E. Drufva, Constance B. Bailey, Elijah G. Hix
Rok vydání: 2020
Předmět:
0106 biological sciences
ER
enoylreductase

ACP
acyl carrier protein

Mod
module

Computer science
lcsh:Biotechnology
Biomedical Engineering
Mutagenesis (molecular biology technique)
Computational biology
01 natural sciences
Applied Microbiology and Biotechnology
Article
03 medical and health sciences
Polyketide
Synthetic biology
EI
enoylisomerase

MT
methyltransferase

LM
loading module

Structural Biology
KS
ketosynthase

lcsh:TP248.13-248.65
010608 biotechnology
Polyketide synthase
Genetics
AT
acyltransferase

PS
pyran synthase

Site-directed mutagenesis
Saturated mutagenesis
lcsh:QH301-705.5
030304 developmental biology
Saturation mutagenesis
0303 health sciences
biology
DEBS
6-deoxyerthronolide B synthase

Rational design
Protein engineering
SNAC
N-acetyl cysteamine

lcsh:Biology (General)
biology.protein
PKS
polyketide synthase

KR
ketoreductase

DH
dehydratase

Site directed mutagenesis
Zdroj: Synthetic and Systems Biotechnology, Vol 5, Iss 2, Pp 62-80 (2020)
Synthetic and Systems Biotechnology
ISSN: 2405-805X
DOI: 10.1016/j.synbio.2020.04.001
Popis: Modular polyketide synthases (PKSs) are a multidomain megasynthase class of biosynthetic enzymes that have great promise for the development of new compounds, from new pharmaceuticals to high value commodity and specialty chemicals. Their colinear biosynthetic logic has been viewed as a promising platform for synthetic biology for decades. Due to this colinearity, domain swapping has long been used as a strategy to introduce molecular diversity. However, domain swapping often fails because it perturbs critical protein-protein interactions within the PKS. With our increased level of structural elucidation of PKSs, using judicious targeted mutations of individual residues is a more precise way to introduce molecular diversity with less potential for global disruption of the protein architecture. Here we review examples of targeted point mutagenesis to one or a few residues harbored within the PKS that alter domain specificity or selectivity, affect protein stability and interdomain communication, and promote more complex catalytic reactivity.
Databáze: OpenAIRE