The aerobiome uncovered: Multi-marker metabarcoding reveals potential drivers of turn-over in the full microbial community in the air
| Autor: | de Groot, G Arjen, Geisen, Stefan, Wubs, E R Jasper, Meulenbroek, Liz, Laros, Ivo, Snoek, L Basten, Lammertsma, Dennis R, Hansen, Lars H, Slim, Pieter A, Sub Bioinformatics, Theoretical Biology and Bioinformatics |
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| Přispěvatelé: | Sub Bioinformatics, Theoretical Biology and Bioinformatics |
| Jazyk: | angličtina |
| Rok vydání: | 2021 |
| Předmět: |
010504 meteorology & atmospheric sciences
Microorganism Bos- en Landschapsecologie 010501 environmental sciences Biology 01 natural sciences Human disease Meteorology Environmental Science(all) Early-warning system Humans Forest and Landscape Ecology GE1-350 Microbiome Laboratorium voor Nematologie Vegetatie 0105 earth and related environmental sciences General Environmental Science Vegetation Bacteria Ecology Microbiota fungi Fungi Allergens Plants PE&RC Environmental sciences Taxon Microbial population biology Community composition Turnover Aerobiome monitoring Microbial dispersal Potential pathogens Co-dispersal Dierecologie Biological dispersal Vegetatie Bos- en Landschapsecologie Animal Ecology Vegetation Forest and Landscape Ecology Laboratory of Nematology |
| Zdroj: | Environment International, 154 de Groot, G A, Geisen, S, Wubs, E R J, Meulenbroek, L, Laros, I, Snoek, L B, Lammertsma, D R, Hansen, L H & Slim, P A 2021, ' The aerobiome uncovered : Multi-marker metabarcoding reveals potential drivers of turn-over in the full microbial community in the air ', Environment International, vol. 154, 106551 . https://doi.org/10.1016/j.envint.2021.106551 Environment International, Vol 154, Iss, Pp 106551-(2021) Environment international, 154, 1. Elsevier Limited Environment International 154 (2021) |
| ISSN: | 0160-4120 1873-6750 |
| Popis: | Air is a major conduit for the dispersal of organisms at the local and the global scale. Most research has focused on the dispersal of plants, vertebrates and human disease agents. However, the air represents a key dispersal medium also for bacteria, fungi and protists. Many of those represent potential pathogens of animals and plants and have until now gone largely unrecorded. Here we studied the turnover in composition of the entire aerobiome, the collective diversity of airborne microorganisms. For that we performed daily analyses of all prokaryotes and eukaryotes (including plants) using multi-marker high-throughput sequencing for a total of three weeks. We linked the resulting communities to local weather conditions, to assess determinants of aerobiome composition and distribution. We observed hundreds of microbial taxa, mostly belonging to spore-forming organisms including fungi, but also protists. Additionally, we detected many potential human- and plant-pathogens. Community composition fluctuated on a daily basis and was linked to concurrent weather conditions, particularly air pressure and temperature. Using network analyses, we identified taxonomically diverse groups of organisms with correlated temporal dynamics. In part, this was due to co-variation with environmental conditions, while we could also detect specific host-parasite interactions. This study provides the first full inventory of the aerobiome and identifies putative drivers of its dynamics in terms of taxon composition. This knowledge can help develop early warning systems against pathogens and improve our understanding of microbial dispersal. Environment International, 154 ISSN:0160-4120 ISSN:1873-6750 |
| Databáze: | OpenAIRE |
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