Complete genome sequence of a new bipartite begomovirus associated with leaf curl disease of Capsicum annum
| Autor: | Neeti Sanan-Mishra, Anurag Kumar Sahu |
|---|---|
| Rok vydání: | 2020 |
| Předmět: |
Genetics
Whole genome sequencing biology Sequence analysis fungi Begomovirus Nucleic acid sequence food and beverages Environmental Science (miscellaneous) biology.organism_classification Agricultural and Biological Sciences (miscellaneous) Genome DNA sequencing Genome Reports Leaf curl Biotechnology Sequence (medicine) |
| Zdroj: | 3 Biotech |
| ISSN: | 2190-5738 2190-572X |
| DOI: | 10.1007/s13205-020-02220-6 |
| Popis: | The complete bipartite genome, consisting of DNA-A and DNA-B, of a novel begomovirus isolate associated with apical leaf curling and crinkled leaf disease of Chili (Capsicum annum) from New Delhi, India was cloned and sequenced. The sequence of DNA-A (2737 nt) and DNA-B (2692 nt) of the virus was submitted to NCBI, USA under the accessions MK069591 & MG597211, respectively. Sequence identity of the common region (CR) and presence of identical iterons (GAGTG) between the DNA-A and DNA-B clones indicate that they constitute a related pair. The virus corresponds to a novel species of tomato leaf curl virus and sequence analysis has ruled out the involvement of recombination events in its evolution. Therefore, we report the complete nucleotide sequence of a new bipartite begomovirus infecting Capsicum annum, a vegetable crop communally cultivated throughout India. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s13205-020-02220-6) contains supplementary material, which is available to authorized users. |
| Databáze: | OpenAIRE |
| Externí odkaz: |
|
Full text from SpringerLink