LabSystem Gen, a tool for structuring and analyzing genetic data in histocompatibility laboratories
| Autor: | Luiz Claudio Demes da Mata Sousa, Pedro de Alcíntara dos Santos Neto, Semiramis Jamil Hadad do Monte, Fernando da Fonseca de Souza |
|---|---|
| Rok vydání: | 2012 |
| Předmět: |
Structure (mathematical logic)
Biological data Information retrieval business.industry Computer science Histocompatibility Testing Computational Biology Reproducibility of Results Health Informatics Context (language use) Human leukocyte antigen Automation Tissue Donors Computer Science Applications Data mapping World Wide Web Transplantation User-Computer Interface HLA Antigens Databases Genetic Information system Database Management Systems Humans business |
| Zdroj: | Computers in Biology and Medicine. 42:474-479 |
| ISSN: | 0010-4825 |
| DOI: | 10.1016/j.compbiomed.2011.12.016 |
| Popis: | Analysis of HLA data involves queries on web portals, whose search parameters are data stored in laboratories' databases. In order to automate these queries, one approach is to structure laboratory data into a database and to develop bioinformatic tools to perform the data mapping. In this context, we developed the LabSystem Gen tool that allows users to create a Laboratory Information System, without programming. Additionally we implemented a framework that provides bioinformatic tools, transparent access to public HLA (human leukocyte antigen) information resources. We demonstrated the LabSystemGen system by implementing BMDdb, which is a LIMS that manages data of recipients and donors of organ transplant. |
| Databáze: | OpenAIRE |
| Externí odkaz: |
|
Full Text from ScienceDirect