ExTopoDB: a database of experimentally derived topological models of transmembrane proteins
| Autor: | Pantelis G. Bagos, Konstantinos D. Tsirigos, Theodore D. Liakopoulos, Xanthi Andrianou, Stavros J. Hamodrakas, Georgios N. Tsaousis |
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| Rok vydání: | 2010 |
| Předmět: |
Statistics and Probability
Supplementary data Database Protein Conformation Topological information Membrane Proteins Biology computer.software_genre Topology Network topology Biochemistry Transmembrane protein Computer Science Applications Computational Mathematics Computational Theory and Mathematics Sequence Analysis Protein Membrane topology Databases Protein Molecular Biology computer Software Topology (chemistry) |
| Zdroj: | Bioinformatics. 26:2490-2492 |
| ISSN: | 1367-4811 1367-4803 |
| Popis: | Summary: ExTopoDB is a publicly accessible database of experimentally derived topological models of transmembrane proteins. It contains information collected from studies in the literature that report the use of biochemical methods for the determination of the topology of α-helical transmembrane proteins. Transmembrane protein topology is highly important in order to understand their function and ExTopoDB provides an up to date, complete and comprehensive dataset of experimentally determined topologies of α-helical transmembrane proteins. Topological information is combined with transmembrane topology prediction resulting in more reliable topological models. Availability: http://bioinformatics.biol.uoa.gr/ExTopoDB Contact: shamodr@biol.uoa.gr Supplementary information: Supplementary data are available at Bioinformatics online. |
| Databáze: | OpenAIRE |
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