Clinical and molecular practice of European thoracic pathology laboratories during the COVID-19 pandemic. The past and the near future
| Autor: | John R. Gosney, G. Troncone, W. Dietmaier, A. De Muret, P. Brest, S.R.Y. Cajal, E. Long-Mira, G. Gorkiewicz, H. Wolff, Lina Carvalho, J. Stojsic, A. Hofman, Izidor Kern, L. Chalabreysse, A. Dema, Cristian Ortiz-Villalón, R. Schiappa, Lukas Bubendorf, S. Garcia, L. Gibault, L. de Leval, M.-C. Copin, Aurélie Cazes, Hans-Ulrich Schildhaus, E. Shaw, M. Antoine, Véronique Hofman, A. Stenzinger, M. Garcia-Martos, M. Evert, V. Nakache, E. Chamorey, S. Savic-Prince, P. Boström, P. Brousset, M. Sajin, S. Lassalle, H. Begueret, Wim Timens, Mark Kriegsmann, Mauro Papotti, Peter Schirmacher, M.-P. Chenard, M. Barberis, V. Thomas de Montpreville, J. Meilleroux, P. Delongova, M. Ilié, C. Bonnetaud, C. Werlein, Keith M. Kerr, J.-F. Côté, A. Mamilos, A. Lupo, Patrick Pauwels, Frédérique Penault-Llorca, I. Serre, N. Poté, C.-H. Marquette, Paul Hofman, J.-C. Sabourin, J.-P. Berthet, Giuseppe Pelosi, A. Foulet, D. Damotte, D. Sizaret, Fabien Forest, Erik Thunnissen, A. Panizo, L. Panico, O. Pop, G. Cathomas, M. Kossai, I. Salmon, F. Calabrese, F. Bibeau, Aurelie Fabre, R. Matěj, J. Benzaquen, Danny Jonigk |
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| Přispěvatelé: | Institut de Recherche sur le Cancer et le Vieillissement (IRCAN), Université Nice Sophia Antipolis (... - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA), FHU OncoAge - Pathologies liées à l’âge [CHU Nice] (OncoAge), Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Pharmacologie Moléculaire et Cellulaire [UNIV Côte d'Azur] (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA), Université Côte d'Azur (UCA), Centre de Lutte contre le Cancer Antoine Lacassagne [Nice] (UNICANCER/CAL), UNICANCER-Université Côte d'Azur (UCA), CHU Tenon [AP-HP], Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), European Institute of Oncology IRCCS [Milan, Italy] (EIO), CHU Bordeaux [Bordeaux], CHU Caen, Normandie Université (NU)-Tumorothèque de Caen Basse-Normandie (TCBN), Université de Caen Normandie (UNICAEN), Normandie Université (NU), Turku University Hospital (TYKS), Centre de Recherches en Cancérologie de Toulouse (CRCT), Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut Universitaire du Cancer de Toulouse - Oncopole (IUCT Oncopole - UMR 1037), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-CHU Toulouse [Toulouse]-Institut National de la Santé et de la Recherche Médicale (INSERM), University Hospital Basel [Basel], University of Coimbra [Portugal] (UC), Kantonsspital Baselland [Bruderholz] (KSBL), Physiopathologie et Epidémiologie des Maladies Respiratoires (PHERE (UMR_S_1152 / U1152)), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Paris (UP), Groupement Hospitalier Est [Bron], Hospices Civils de Lyon (HCL), CHU Strasbourg, CHU Lille, Université de Lille, Institut Mutualiste de Montsouris (IMM), Centre de Recherche des Cordeliers (CRC (UMR_S_1138 / U1138)), École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Université de Paris (UP), Hôpital Cochin [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), University of Lausanne (UNIL), University Hospital Ostrava, Centre chirurgical Marie Lannelongue, CHU Trousseau [Tours], Centre Hospitalier Régional Universitaire de Tours (CHRU Tours), Victor Babeş University of Medicine and Pharmacy (UMFT), University of Regensburg, University College Dublin [Dublin] (UCD), Centre Hospitalier Universitaire de Saint-Etienne (CHU de Saint-Etienne), Centre Hospitalier Le Mans (CH Le Mans), Hôpital Nord AP‐MM Marseille, France (AP‐MM Marseille), Aix Marseille Université (AMU), Hospital General Universitario 'Gregorio Marañón' [Madrid], Hôpital Européen Georges Pompidou [APHP] (HEGP), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpitaux Universitaires Paris Ouest - Hôpitaux Universitaires Île de France Ouest (HUPO), University of Graz, Hannover Medical School [Hannover] (MHH), Royal Liverpool University Hospital, University of Liverpool-Royal Liverpool and Broadgreen University Hospital NHS Trust, University Clinic Golnik, Aberdeen Royal Infirmary, Aberdeen, Centre Jean Perrin [Clermont-Ferrand] (UNICANCER/CJP), UNICANCER, Heidelberg University Hospital [Heidelberg], Charles University [Prague] (CU), Karolinska University Hospital [Stockholm], Monaldi-Cotugno-CTO, Complejo Hospitalario de Navarra, Università degli studi di Torino (UNITO), University of Antwerp (UA), University of Milan, University of Oradea, Romania, AP-HP - Hôpital Bichat - Claude Bernard [Paris], Vall d'Hebron University Hospital [Barcelona], Génomique et Médecine Personnalisée du Cancer et des Maladies Neuropsychiatriques (GPMCND), Université de Rouen Normandie (UNIROUEN), Normandie Université (NU)-Normandie Université (NU)-Institut National de la Santé et de la Recherche Médicale (INSERM), CHU Rouen, Université libre de Bruxelles (ULB), University of Medicine and Pharmacy 'Carol Davila' Bucharest (UMPCD), University Hospital [Essen, Germany], Hôpital Gui de Chauliac, Université Montpellier 1 (UM1)-Centre Hospitalier Régional Universitaire [Montpellier] (CHRU Montpellier), University Hospital Southampton NHS Foundation Trust, University of Belgrade [Serbia], Institute of Zoology [Serbia], University of Amsterdam [Amsterdam] (UvA), University of Groningen [Groningen], Università degli studi di Napoli Federico II, Finnish Institute of Occupational Health of Helsinki, University of Padova Medical School, Université Nice Sophia Antipolis (1965 - 2019) (UNS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Pharmacologie Moléculaire et Cellulaire [UNIV Côte d'Azur] (UPMC)-Université Côte d'Azur (UCA), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Université de Toulouse (UT)-Université de Toulouse (UT)-Centre Hospitalier Universitaire de Toulouse (CHU Toulouse)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité), École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Université Paris Cité (UPCité), Université de Lausanne = University of Lausanne (UNIL), Centre Chirurgical Marie Lannelongue (CCML), Centre Hospitalier Universitaire de Saint-Etienne [CHU Saint-Etienne] (CHU ST-E), Karl-Franzens-Universität Graz, Università degli studi di Torino = University of Turin (UNITO), Università degli Studi di Milano = University of Milan (UNIMI), University of Oradea, Hôpital Gui de Chauliac [CHU Montpellier], Centre Hospitalier Régional Universitaire [Montpellier] (CHRU Montpellier), University of Naples Federico II = Università degli studi di Napoli Federico II, Università degli Studi di Padova = University of Padua (Unipd), Institut Català de la Salut, [Hofman P, Ilié M, Nakache V] Laboratory of Clinical and Experimental Pathology, FHU OncoAge, BB-0033-00025, Louis Pasteur Hospital, IRCAN, Université Côte d'Azur, Nice, France. [Brest P] Team 4, IRCAN, INSERM, CNRS, Centre Antoine-Lacassagne, Université Côte d'Azur, Nice, France. [Chamorey E, Schiappa R] Epidemiology and Biostatistics Unit, Centre Antoine-Lacassagne, Université Côte d'Azur, Nice, France. [Cajal SRY] Servei d’Anatomia Patològica, Vall d'Hebron Hospital Universitari, Barcelona, Spain, Vall d'Hebron Barcelona Hospital Campus, Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre Hospitalier Universitaire de Toulouse (CHU Toulouse)-Institut National de la Santé et de la Recherche Médicale (INSERM), COLO, Mouniati, Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)-Institut de Pharmacologie Moléculaire et Cellulaire [UNIV Côte d'Azur] (UPMC), Karl-Franzens-Universität [Graz, Autriche], Hofman, P., Ilie, M., Chamorey, E., Brest, P., Schiappa, R., Nakache, V., Antoine, M., Barberis, M., Begueret, H., Bibeau, F., Bonnetaud, C., Bostrom, P., Brousset, P., Bubendorf, L., Carvalho, L., Cathomas, G., Cazes, A., Chalabreysse, L., Chenard, M. -P., Copin, M. -C., Cote, J. -F., Damotte, D., de Leval, L., Delongova, P., Thomas de Montpreville, V., de Muret, A., Dema, A., Dietmaier, W., Evert, M., Fabre, A., Forest, F., Foulet, A., Garcia, S., Garcia-Martos, M., Gibault, L., Gorkiewicz, G., Jonigk, D., Gosney, J., Hofman, A., Kern, I., Kerr, K., Kossai, M., Kriegsmann, M., Lassalle, S., Long-Mira, E., Lupo, A., Mamilos, A., Matej, R., Meilleroux, J., Ortiz-Villalon, C., Panico, L., Panizo, A., Papotti, M., Pauwels, P., Pelosi, G., Penault-Llorca, F., Pop, O., Pote, N., Cajal, S. R. Y., Sabourin, J. -C., Salmon, I., Sajin, M., Savic-Prince, S., Schildhaus, H. -U., Schirmacher, P., Serre, I., Shaw, E., Sizaret, D., Stenzinger, A., Stojsic, J., Thunnissen, E., Timens, W., Troncone, G., Werlein, C., Wolff, H., Berthet, J. -P., Benzaquen, J., Marquette, C. -H., Hofman, V., Calabrese, F. |
| Rok vydání: | 2021 |
| Předmět: |
Cancer Research
Pathology [SDV]Life Sciences [q-bio] Medizin Disease Outbreaks varnost Biosafety 0302 clinical medicine Surveys and Questionnaires Pandemic virosis::infecciones por virus ARN::infecciones por Nidovirales::infecciones por Coronaviridae::infecciones por Coronavirus [ENFERMEDADES] Medicine Pathology Molecular COVID-19 activity biosafety lung cancer pathology biološka varnost Health Occupations::Medicine::Pathology::Pathology Clinical [DISCIPLINES AND OCCUPATIONS] Original Research Biological Specimen Banks 0303 health sciences Pathology Clinical Molecular pathology Virus Diseases::RNA Virus Infections::Nidovirales Infections::Coronaviridae Infections::Coronavirus Infections [DISEASES] Workload Clinical Laboratory Services Containment of Biohazards Biobank 3. Good health [SDV] Life Sciences [q-bio] Europe covid-19 Oncology 030220 oncology & carcinogenesis Thoracic diseases COVID-19 (Malaltia) - Europa Laboratoris anatòmics localizaciones geográficas::Europa (continente) [DENOMINACIONES GEOGRÁFICAS] safety medicine.medical_specialty 2019-20 coronavirus outbreak Coronavirus disease 2019 (COVID-19) lung neoplasms pljučni rak Geographic Locations::Europe [GEOGRAPHICALS] Specimen Handling 03 medical and health sciences Thoracic Diseases udc:616.9 Humans Pandemics 030304 developmental biology SARS-CoV-2 business.industry pljučne novotvorbe profesiones sanitarias::medicina::anatomía patológica::patología clínica [DISCIPLINAS Y OCUPACIONES] patologija Human medicine business Biological Specimen Banks/organization & administration Biological Specimen Banks/statistics & numerical data COVID-19/epidemiology COVID-19/prevention & control COVID-19/virology Clinical Laboratory Services/statistics & numerical data Clinical Laboratory Services/trends Containment of Biohazards/statistics & numerical data Europe/epidemiology Forecasting Pathology Clinical/methods Pathology Clinical/statistics & numerical data Pathology Clinical/trends Pathology Molecular/methods Pathology Molecular/statistics & numerical data Pathology Molecular/trends SARS-CoV-2/isolation & purification SARS-CoV-2/physiology Specimen Handling/methods Specimen Handling/statistics & numerical data Thoracic Diseases/diagnosis Thoracic Diseases/therapy |
| Zdroj: | ESMO Open, 6(1):100024. BMJ PUBLISHING GROUP ESMO Open ESMO open, vol. 6, no. 1, pp. 100024 ESMO Open, European Society for Medical Oncology, 2021, 6 (1), pp.100024. ⟨10.1016/j.esmoop.2020.100024⟩ ESMO Open, 2021, 6 (1), pp.100024. ⟨10.1016/j.esmoop.2020.100024⟩ Scientia ESMO open, vol. 6, no. 1, pp. 1-10, 2020. |
| ISSN: | 2059-7029 |
| DOI: | 10.1016/j.esmoop.2020.100024 |
| Popis: | Background This study evaluated the consequences in Europe of the COVID-19 outbreak on pathology laboratories orientated toward the diagnosis of thoracic diseases. Materials and methods A survey was sent to 71 pathology laboratories from 21 European countries. The questionnaire requested information concerning the organization of biosafety, the clinical and molecular pathology, the biobanking, the workload, the associated research into COVID-19, and the organization of education and training during the COVID-19 crisis, from 15 March to 31 May 2020, compared with the same period in 2019. Results Questionnaires were returned from 53/71 (75%) laboratories from 18 European countries. The biosafety procedures were heterogeneous. The workload in clinical and molecular pathology decreased dramatically by 31% (range, 3%-55%) and 26% (range, 7%-62%), respectively. According to the professional category, between 28% and 41% of the staff members were not present in the laboratories but did teleworking. A total of 70% of the laboratories developed virtual meetings for the training of residents and junior pathologists. During the period of study, none of the staff members with confirmed COVID-19 became infected as a result of handling samples. Conclusions The COVID-19 pandemic has had a strong impact on most of the European pathology laboratories included in this study. Urgent implementation of several changes to the organization of most of these laboratories, notably to better harmonize biosafety procedures, was noted at the onset of the pandemic and maintained in the event of a new wave of infection occurring in Europe. Highlights • Biosafety measures used in the first wave of the COVID-19 crisis were heterogeneous in 53 European pathology laboratories. • A dramatic decrease of the workload in pathology laboratories was noted. • No case of healthcare workers contaminated with SARS-CoV-2 associated with samples handling was identified. |
| Databáze: | OpenAIRE |
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