Dataset of Arabidopsis plants that overexpress FT driven by a meristem-specific KNAT1 promoter
| Autor: | David Landsman, L. Duplat-Bermúdez, B. Xoconostle-Cázares, Leonardo Mariño-Ramírez, R. Ruiz-Medrano |
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| Rok vydání: | 2016 |
| Předmět: |
0301 basic medicine
Genetics Multidisciplinary Bioinformatics Wild type food and beverages Promoter Locus (genetics) Biology Meristem lcsh:Computer applications to medicine. Medical informatics biology.organism_classification Flowering 03 medical and health sciences 030104 developmental biology Differential expression Arabidopsis Gene expression lcsh:R858-859.7 Homeobox lcsh:Science (General) Gene lcsh:Q1-390 Data Article |
| Zdroj: | Data in Brief Data in Brief, Vol 8, Iss, Pp 520-528 (2016) |
| ISSN: | 2352-3409 |
| DOI: | 10.1016/j.dib.2016.06.002 |
| Popis: | In this dataset we integrated figures comparing leaf number and rosette diameter in three Arabidopsis FT overexpressor lines (AtFTOE) driven by KNAT1 promoter, “A member of the KNOTTED class of homeodomain proteins encoded by the STM gene of Arabidopsis” [5], vs Wild Type (WT) Arabidopsis plats. Also, presented in the tables are some transcriptomic data obtained by RNA-seq Illumina HiSeq from rosette leaves of Arabidopsis plants of AtFTOE 2.1 line vs WT with accession numbers SRR2094583 and SRR2094587 for AtFTOE replicates 1–3 and AtWT for control replicates 1–2 respectively. Raw data of paired-end sequences are located in the public repository of the National Center for Biotechnology Information of the National Library of Medicine, National Institutes of Health, United States of America, Bethesda, MD, USA as Sequence Read Archive (SRA). Performed analyses of differential expression genes are visualized by Mapman and presented in figures. “Transcriptomic analysis of Arabidopsis overexpressing flowering locus T driven by a meristem-specific promoter that induces early flowering” [2], described the interpretation and discussion of the obtained data. Keywords: Differential expression, Bioinformatics, Flowering |
| Databáze: | OpenAIRE |
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