Additional file 1 of Characterisation of mobile genetic elements in Mycoplasma hominis with the description of ICEHo-II, a variant mycoplasma integrative and conjugative element

Autor: Henrich, Birgit, Hammerlage, Stephanie, Scharf, Sebastian, Haberhausen, Diana, Fürnkranz, Ursula, Köhrer, Karl, Peitzmann, Lena, Fiori, Pier Luigi, Spergser, Joachim, Pfeffer, Klaus, Dilthey, Alexander T.
Rok vydání: 2020
DOI: 10.6084/m9.figshare.13204637
Popis: Additional file 1. Homology of CDS6. Deduced protein sequences of CDS6 derived from M. hominis strains FBG (BHBFJMJE_00471), SP10291 (HDENHCDK_00553), TO0613 (WP_036439043.1), PL5 (WP_036439043.1), and 4788 (WP_036439043.1) and of M. fermentans strains M64 (ADV34390.1 (I) and ADV34456.1(II)) and PG18 (ICEF-IA (AAN85216.1 (IA)) and ICEF-II-A (AAN85259.1 (II-A)). Two chromosomal proteins of M. hominis PG21 (MHO_0070 (CAX37141.1) and MHO_1280 (CAX37262.1)) were used as unrelated ICE-outliners in ClustalW-based Multiple Sequence Alignment. A. Phylogenetic tree; B. Percent amino acid identities and divergences; and C. Multiple Sequence Alignment of CDS6 encoded proteins. Identical amino acids are marked in green, isofunctional amino acids marked in yellow.
Databáze: OpenAIRE