The A150V Polymorphism of Genotype 3 Hepatitis C Virus Polymerase Inhibits Interferon Alfa by Suppressing Protein Kinase R Activation

Autor: Swathi Rajagopal, Graham R. Foster, Meleri Jones, Peter A C Wing, Wing-Yiu Jason Lee
Rok vydání: 2021
Předmět:
0301 basic medicine
viruses
Protein Kinase R
Apoptosis
G3
genotype 3

Hepacivirus
Viral Nonstructural Proteins
Virus Replication
medicine.disease_cause
eIF-2 Kinase
chemistry.chemical_compound
0302 clinical medicine
Interferon
Tumor Cells
Cultured

Polymerase
Original Research
biology
Liver Neoplasms
Gastroenterology
Hepatitis C
17-AAG
geldanamycin analogue

Real-time polymerase chain reaction
HCV
hepatitis C virus

RNA
Viral

030211 gastroenterology & hepatology
medicine.drug
Hepatitis C Virus
FSC
forward scatter

Carcinoma
Hepatocellular

Hepatitis C virus
PBS
phosphate-buffered saline

Alpha interferon
SEM
standard error of the mean

Antiviral Agents
PKR
protein kinase R

03 medical and health sciences
2-AP
2-aminopurine

medicine
ISG
interferon-stimulated gene

Humans
IFN
interferon

lcsh:RC799-869
NS5B
Interferon alfa
Polymorphism
Genetic

Hepatology
ISGF3
interferon-stimulated factor 3

RT-qPCR
reverse transcriptase quantitative polymerase chain reaction

Interferon-alpha
DMEM
Dulbecco modified Eagle medium

PE
phycoerythrin

RNA-Dependent RNA Polymerase
WT
wild-type

Virology
Protein kinase R
Viral Replication
030104 developmental biology
chemistry
biology.protein
dsRNA
double-stranded RNA

lcsh:Diseases of the digestive system. Gastroenterology
Replicon
Zdroj: Cellular and Molecular Gastroenterology and Hepatology
Cellular and Molecular Gastroenterology and Hepatology, Vol 11, Iss 4, Pp 1163-1175 (2021)
ISSN: 2352-345X
DOI: 10.1016/j.jcmgh.2020.11.012
Popis: Background & Aims Despite recent advances in antiviral therapy for hepatitis C virus (HCV), a proportion of patients with genotype 3 (G3) HCV infection do not respond to current all oral treatment regimens. Genomic analyses have identified key polymorphisms correlating with increased resistance to direct-acting antivirals. We previously reported that amino acid polymorphisms (A150V and K206E) in the polymerase (NS5B) of G3 HCV reduce response to sofosbuvir. We now demonstrate that these polymorphisms alter the response to interferon alpha. Methods Quantitative polymerase chain reaction, immunofluorescence, luciferase activity assay, immunoblotting, and flow cytometry were used to study the antiviral effect of interferon (IFN) on DBN G3 HCV-infected cells and G3 HCV replicons. Results We show the presence of the A150V polymorphism markedly reduces the response to IFN alpha (IC50 of S52_WT = 1.162 IU/mL and IC50 of S52_A150V = 14.45 IU/mL, 12.4-fold difference). The induction of IFN-stimulated genes in A150V replicon cells is unaffected, but nuclear localization of active protein kinase R (PKR) is reduced. Blockade of PKR activity reduced the antiviral effect of IFN on wild-type replicons, whereas augmented PKR activation promoted the antiviral effect of IFN on A150V replicons. Furthermore, we show that impaired activation of PKR in A150V replicon cells diminishes cellular apoptosis. Conclusions These results demonstrate that polymorphisms reducing response rates to direct-acting antivirals may function beyond conferring drug resistance by modulating the intrinsic cellular antiviral response.
Databáze: OpenAIRE