Jatrophihabitans telluris sp. nov., isolated from sediment soil of lava forest wetlands and the emended description of the genus Jatrophihabitans
| Autor: | Jong-Shik Kim, Suk-Hyung Ko, Mi Kyung Eom, Dae-Shin Kim, Min Kuk Suh, Kwang Kyu Kim, Jung-Sook Lee, Keun Chul Lee, Yong Kook Shin |
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| Rok vydání: | 2018 |
| Předmět: |
0301 basic medicine
DNA Bacterial Diamino acid Peptidoglycan Forests Microbiology Actinobacteria 03 medical and health sciences chemistry.chemical_compound Glycolipid Cell Wall RNA Ribosomal 16S Botany Actinomycetales Republic of Korea Ecology Evolution Behavior and Systematics Phospholipids Phylogeny Soil Microbiology Base Composition biology Phylogenetic tree Pigmentation Fatty Acids Vitamin K 2 General Medicine Sequence Analysis DNA biology.organism_classification 16S ribosomal RNA Terpenoid Bacterial Typing Techniques 030104 developmental biology chemistry Wetlands Taxonomy (biology) Glycolipids |
| Zdroj: | International journal of systematic and evolutionary microbiology. 68(4) |
| ISSN: | 1466-5034 |
| Popis: | A novel actinobacterial strain, designated N237T, was isolated from sediment soil of wetlands at Meonmulkkak, Dongbaek-Dongsan, the lava forest, Gotjawal, Jeju, Republic of Korea. Cells of strain N237T were Gram-stain-positive, non-motile rods and formed pale yellow colonies on ten-fold diluted Reasoner’s 2A agar. Strain N237T contained iso-C16 : 0 and C17 : 1 ω8c as the major fatty acids, MK-9(H4) as the predominant isoprenoid quinone and meso-DAP as the diamino acid in the peptidoglycan. It contained diphosphatidylglycerol, phosphatidylinositol polymannosides, an unidentified phospholipid, an unidentified aminophospholipid, an unidentified aminolipid, two unidentified glycophospholipids, three unidentified glycolipids and two unidentified lipids as polar lipids. The DNA G+C content was 68.1 mol%. Strain N237T formed a separate lineage in the genus Jatrophihabitans , as demonstrated by phylogenetic analysis based on 16S rRNA sequencing. It was most closely related to Jatrophihabitans soli KIS75-12T (95.6 % sequence similarity). The combined phenotypic, chemotaxonomic and phylogenetic characteristics supported the conclusion that strain N237T represents a novel species in the genus Jatrophihabitans , for which the name Jatrophihabitans telluris sp. nov. is proposed. The type strain is N237T (=KCTC 39922T=NRRL B-65477T). |
| Databáze: | OpenAIRE |
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