Draft genome sequences of two oriental melons, Cucumis melo L. var. makuwa
| Autor: | Namjin Koo, Doil Choi, Yong-Min Kim, Young Mi Sim, Suk-Yoon Kwon, Ah-Young Shin, Seungill Kim |
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| Rok vydání: | 2019 |
| Předmět: |
0106 biological sciences
Statistics and Probability Data Descriptor Plant genetics Melon Library and Information Sciences Plant disease resistance 01 natural sciences Genome Plant breeding Education 03 medical and health sciences Cucumis melo Botany lcsh:Science Gene 030304 developmental biology Whole genome sequencing 0303 health sciences biology food and beverages Chromosome Mapping biology.organism_classification humanities Computer Science Applications lcsh:Q Statistics Probability and Uncertainty Cucumis Genome Plant 010606 plant biology & botany Information Systems |
| Zdroj: | Scientific Data Scientific Data, Vol 6, Iss 1, Pp 1-8 (2019) |
| ISSN: | 2052-4463 |
| Popis: | Oriental melon (Cucumis melo L. var. makuwa) is one of the most important cultivated cucurbits, and is grown widely in Northeast Asian countries. With increasing interest in its biological properties and economic importance, oriental melon has become an attractive model crop for studying various horticultural traits. A previous genome sequence of the melon was constructed from a homozygous double-haploid line. Thus, individual reference genomes are required to perform functional studies and further breeding applications. Here, we report draft genome sequences of two oriental melons, Chang Bougi and SW3. The assembled 344 Mb genome of Chang Bougi was obtained with scaffold N50 1.0 Mb, and 36,235 genes were annotated. The 354 Mb genome of SW3 was assembled with scaffold N50 1.6 Mb, and has 38,173 genes. These newly constructed genomes will enable studies of fruit development, disease resistance, and breeding applications in the oriental melon. Measurement(s)DNATechnology Type(s)DNA sequencingFactor Type(s)reference genomeSample Characteristic - OrganismCucumis melo Machine-accessible metadata file describing the reported data: 10.6084/m9.figshare.9939629 |
| Databáze: | OpenAIRE |
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