Genome sequence of Microvirga lupini strain LUT6T, a novel Lupinus alphaproteobacterial microsymbiont from Texas

Autor:	Matthew A. Parker, Victor Markowitz, Rui Tian, Marcel Huntemann, Lynne Goodwin, Roxanne Tapia, Wayne Reeve, Nikos C. Kyrpides, Hazuki Teshima, Cliff Han, Konstantinos Liolios, Natalia Ivanova, James Han, Amrita Pati, Tanja Woyke, Konstantinos Mavromatis
Rok vydání:	2014
Předmět:	Whole genome sequencing Genetics biology Microvirga lupini Alphaproteobacteria rhizobia biology.organism_classification Genome Short Genome Reports Rhizobia Lupinus Symbiosis nitrogen fixation Botany Lupinus texensis root-nodule bacteria
Zdroj:	Standards in Genomic Sciences Web of Science
ISSN:	1944-3277
Popis:	Microvirga lupini LUT6(T) is an aerobic, non-motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Lupinus texensis. LUT6(T) was isolated in 2006 from a nodule recovered from the roots of the annual L. texensis growing in Travis Co., Texas. LUT6(T) forms a highly specific nitrogen-fixing symbiosis with endemic L. texensis and no other Lupinus species can form an effective nitrogen-fixing symbiosis with this isolate. Here we describe the features of M. lupini LUT6(T), together with genome sequence information and its annotation. The 9,633,614 bp improved high quality draft genome is arranged into 160 scaffolds of 1,366 contigs containing 10,864 protein-coding genes and 87 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of a DOE Joint Genome Institute 2010 Community Sequencing Project.
Databáze:	OpenAIRE
Externí odkaz:	https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3b5461ea5d4931e88a82cf91f8933b16 https://doi.org/10.4056/sigs.5249382 Zobrazit plný text záznamu Plný text ve formátu PDF