Integrating genome-wide CRISPR immune screen with multi-omic clinical data reveals distinct classes of tumor intrinsic immune regulators

Autor: Rina M. Mbofung, Yunfei Wang, Xiaofang Liang, Nicholas A. Egan, Arash Saeedi, P. Hwu, Cassian Yee, Leila Williams, Navin Varadarajan, Yuan Chen, Weiyi Peng, Zhenhuang Yang, Jodi A. McKenzie, Ke Pan, Ming Sun, Jiakai Hou, Chunyu Xu, Yiwen Chen, Jordi Rodon Ahnert, Leilei Shi, Ritu Bohat
Rok vydání: 2020
Předmět:
0301 basic medicine
Cytotoxicity
Immunologic

Cancer Research
Protein-Arginine N-Methyltransferases
medicine.medical_treatment
T cell
T-Lymphocytes
Immunology
Regulator
Mice
Transgenic

Biology
03 medical and health sciences
0302 clinical medicine
Immune system
Lymphocytes
Tumor-Infiltrating

Cancer immunotherapy
Cell Line
Tumor

Neoplasms
medicine
Tumor Microenvironment
Immunology and Allergy
CRISPR
Animals
Humans
Immune Checkpoint Inhibitors
RC254-282
Pharmacology
Tumor microenvironment
Neoplasms. Tumors. Oncology. Including cancer and carcinogens
Cancer
Basic Tumor Immunology
Immunotherapy
Genomics
medicine.disease
Mice
Inbred C57BL

Repressor Proteins
030104 developmental biology
medicine.anatomical_structure
Oncology
030220 oncology & carcinogenesis
Receptor-Interacting Protein Serine-Threonine Kinases
Cancer research
Molecular Medicine
Tumor Escape
immunotherapy
CRISPR-Cas Systems
Zdroj: Journal for Immunotherapy of Cancer
Journal for ImmunoTherapy of Cancer, Vol 9, Iss 2 (2021)
ISSN: 2051-1426
Popis: BackgroundDespite approval of immunotherapy for a wide range of cancers, the majority of patients fail to respond to immunotherapy or relapse following initial response. These failures may be attributed to immunosuppressive mechanisms co-opted by tumor cells. However, it is challenging to use conventional methods to systematically evaluate the potential of tumor intrinsic factors to act as immune regulators in patients with cancer.MethodsTo identify immunosuppressive mechanisms in non-responders to cancer immunotherapy in an unbiased manner, we performed genome-wide CRISPR immune screens and integrated our results with multi-omics clinical data to evaluate the role of tumor intrinsic factors in regulating two rate-limiting steps of cancer immunotherapy, namely, T cell tumor infiltration and T cell-mediated tumor killing.ResultsOur studies revealed two distinct types of immune resistance regulators and demonstrated their potential as therapeutic targets to improve the efficacy of immunotherapy. Among them, PRMT1 and RIPK1 were identified as a dual immune resistance regulator and a cytotoxicity resistance regulator, respectively. Although the magnitude varied between different types of immunotherapy, genetically targeting PRMT1 and RIPK1 sensitized tumors to T-cell killing and anti-PD-1/OX40 treatment. Interestingly, a RIPK1-specific inhibitor enhanced the antitumor activity of T cell-based and anti-OX40 therapy, despite limited impact on T cell tumor infiltration.ConclusionsCollectively, the data provide a rich resource of novel targets for rational immuno-oncology combinations.
Databáze: OpenAIRE