NOD2 Influences Trajectories of Intestinal Microbiota Recovery After Antibiotic PerturbationSummary

Autor: Simone Lipinski, Jacqueline Moltzau Anderson, Konrad Aden, Felix Sommer, John F. Baines, Wei-Hung Pan, Olivier Boulard, Robert Häsler, Sven Künzel, Philip Rosenstiel, Stephanie T. Stengel, Richa Bharti, Maren Falk-Paulsen, Ateequr Rehman, Mathias Chamaillard
Jazyk: angličtina
Rok vydání: 2020
Předmět:
0301 basic medicine
medicine.drug_class
Antibiotics
IBD
Nod2 Signaling Adaptor Protein
PCoA
principle coordinate analysis

Gut flora
Inflammatory bowel disease
SPF
specific pathogen free

Bacterial cell structure
NOD2
Microbiology
03 medical and health sciences
0302 clinical medicine
GEE
generalized estimating equation

CXCL1
chemokine (C-X-C motif) ligand 1

Gene expression
CD
Crohn’s disease

OTU
operational taxonomic unit

medicine
lcsh:RC799-869
qPCR
quantitative real-time polymerase chain reaction

Feces
Original Research
KO
knockout

IBD
inflammatory bowel disease

Hepatology
biology
Microbiota
Gastroenterology
biology.organism_classification
medicine.disease
WT
wild-type

digestive system diseases
Anti-Bacterial Agents
Gastrointestinal Microbiome
rRNA
ribosomal RNA

GF
germ-free

NOD2
nucleotide-binding oligomerization domain-containing protein 2

030104 developmental biology
ITS
internal transcribed spacer

Microbial Resilience
030211 gastroenterology & hepatology
lcsh:Diseases of the digestive system. Gastroenterology
Bacteria
Antibiotic Treatment
Zdroj: Cellular and Molecular Gastroenterology and Hepatology, Vol 10, Iss 2, Pp 365-389 (2020)
Cellular and Molecular Gastroenterology and Hepatology
Popis: Background & Aims Loss-of-function variants in nucleotide-binding oligomerization domain-containing protein 2 (NOD2) impair the recognition of the bacterial cell wall component muramyl-dipeptide and are associated with an increased risk for developing Crohn’s disease. Likewise, exposure to antibiotics increases the individual risk for developing inflammatory bowel disease. Here, we studied the long-term impact of NOD2 on the ability of the gut bacterial and fungal microbiota to recover after antibiotic treatment. Methods Two cohorts of 20-week-old and 52-week-old wild-type (WT) C57BL/6J and NOD2 knockout (Nod2-KO) mice were treated with broad-spectrum antibiotics and fecal samples were collected to investigate temporal dynamics of the intestinal microbiota (bacteria and fungi) using 16S ribosomal RNA and internal transcribed spacer 1 sequencing. In addition, 2 sets of germ-free WT mice were colonized with either WT or Nod2-KO after antibiotic donor microbiota and the severity of intestinal inflammation was monitored in the colonized mice. Results Antibiotic exposure caused long-term shifts in the bacterial and fungal community composition. Genetic ablation of NOD2 was associated with delayed body weight gain after antibiotic treatment and an impaired recovery of the bacterial gut microbiota. Transfer of the postantibiotic fecal microbiota of Nod2-KO mice induced an intestinal inflammatory response in the colons of germ-free recipient mice compared with respective microbiota from WT controls based on histopathology and gene expression analyses. Conclusions Our data show that the bacterial sensor NOD2 contributes to intestinal microbial community composition after antibiotic treatment and may add to the explanation of how defects in the NOD2 signaling pathway are involved in the etiology of Crohn’s disease.
Graphical abstract
Databáze: OpenAIRE