Nucleic Acids Research
| Autor: | Ross Overbeek, Hyunseung Yoo, Robert Olson, Emily M. Dietrich, Alice R. Wattam, Bruce Parrello, Ronald W. Kenyon, Andrew S. Warren, James J. Davis, Marcus Nguyen, Maulik Shukla, Ralph Butler, Ramy K. Aziz, Jamie C. Overbeek, Rick Stevens, Andrew Guard, Allan Dickerman, Daniel E. Murphy-Olson, Veronika Vonstein, Svetlana Gerdes, Fangfang Xia, Gary J. Olsen, Margo VanOeffelen, Philippe Chlenski, Dawen Xie, Chunhong Mao, Dustin Machi, Rory Butler, Joseph L. Gabbard, Gordon D. Pusch, Chris Thomas, Neal Conrad, Thomas Brettin, Eric K. Nordberg |
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| Přispěvatelé: | Industrial and Systems Engineering |
| Rok vydání: | 2019 |
| Předmět: |
Swine
Interface (Java) Context (language use) Biology Bioinformatics Resource center Mice Resource (project management) National Institute of Allergy and Infectious Diseases (U.S.) Databases Genetic Genetics Database Issue Animals Humans Caenorhabditis elegans Phylogeny Zebrafish Internet Bacteria business.industry Computational Biology Macaca mulatta United States Rats Metadata Drosophila melanogaster Phenotype Workflow Metagenomics Host-Pathogen Interactions The Internet business Chickens Algorithms |
| Zdroj: | Nucleic Acids Research. |
| ISSN: | 1362-4962 0305-1048 |
| DOI: | 10.1093/nar/gkz943 |
| Popis: | The PathoSystems Resource Integration Center (PATRIC) is the bacterial Bioinformatics Resource Center funded by the National Institute of Allergy and Infectious Diseases (https://www.patricbrc.org). PATRIC supports bioinformatic analyses of all bacteria with a special emphasis on pathogens, offering a rich comparative analysis environment that provides users with access to over 250 000 uniformly annotated and publicly available genomes with curated metadata. PATRIC offers web-based visualization and comparative analysis tools, a private workspace in which users can analyze their own data in the context of the public collections, services that streamline complex bioinformatic workflows and command-line tools for bulk data analysis. Over the past several years, as genomic and other omics-related experiments have become more cost-effective and widespread, we have observed considerable growth in the usage of and demand for easy-to-use, publicly available bioinformatic tools and services. Here we report the recent updates to the PATRIC resource, including new web-based comparative analysis tools, eight new services and the release of a command-line interface to access, query and analyze data. National Institute of Allergy and Infectious Diseases (NIAID)United States Department of Health & Human ServicesNational Institutes of Health (NIH) - USANIH National Institute of Allergy & Infectious Diseases (NIAID) [HHSN272201400027C]; NIAIDUnited States Department of Health & Human ServicesNational Institutes of Health (NIH) - USANIH National Institute of Allergy & Infectious Diseases (NIAID) National Institute of Allergy and Infectious Diseases (NIAID) [HHSN272201400027C to R.S.]. Funding for open access charge: NIAID. |
| Databáze: | OpenAIRE |
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