GeneDB--an annotation database for pathogens
| Autor: | Christian A. Olsen, Haiming Wang, Giles S. Velarde, Matthew B. Rogers, Adrian Tivey, David S. Roos, Sandhya Subramanian, Flora J. Logan-Klumpler, Gowthaman Ramasamy, Omar S. Harb, Tim Carver, Deborah F. Smith, Mark Carrington, Brian P. Brunk, Ulrike Boehme, Nishadi De Silva, Christiane Hertz-Fowler, Isabelle Phan, W Andrew Jackson, Siddhartha Mitra, Jacqueline A. McQuillan, Matthew Berriman, Peter J. Myler, Martin Aslett, Robin Houston, Julian Parkhill, Matthew T. G. Holden, Carol Farris |
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| Přispěvatelé: | Parkhill, Julian [0000-0002-7069-5958], Carrington, Mark [0000-0002-6435-7266], Apollo - University of Cambridge Repository |
| Rok vydání: | 2011 |
| Předmět: |
030231 tropical medicine
Genomics Vertebrate and Genome Annotation Project Biology Genome World Wide Web 03 medical and health sciences Annotation 0302 clinical medicine Databases Genetic Controlled vocabulary Genetics Animals Web application Arthropods 030304 developmental biology Genome Helminth Internet 0303 health sciences business.industry Molecular Sequence Annotation Articles Genome project Vocabulary Controlled business Genome Protozoan Genome Bacterial |
| Zdroj: | Nucleic Acids Research |
| ISSN: | 1362-4962 0305-1048 |
| Popis: | GeneDB (http://www.genedb.org) is a genome database for prokaryotic and eukaryotic pathogens and closely related organisms. The resource provides a portal to genome sequence and annotation data, which is primarily generated by the Pathogen Genomics group at the Wellcome Trust Sanger Institute. It combines data from completed and ongoing genome projects with curated annotation, which is readily accessible from a web based resource. The development of the database in recent years has focused on providing database-driven annotation tools and pipelines, as well as catering for increasingly frequent assembly updates. The website has been significantly redesigned to take advantage of current web technologies, and improve usability. The current release stores 41 data sets, of which 17 are manually curated and maintained by biologists, who review and incorporate data from the scientific literature, as well as other sources. GeneDB is primarily a production and annotation database for the genomes of predominantly pathogenic organisms. |
| Databáze: | OpenAIRE |
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