Additional file 10 of High-pressure processing-induced transcriptome response during recovery of Listeria monocytogenes

Autor: Duru, Ilhan Cem, Bucur, Florentina Ionela, Andreevskaya, Margarita, Nikparvar, Bahareh, Ylinen, Anne, Grigore-Gurgu, Leontina, Rode, Tone Mari, Crauwels, Peter, Laine, Pia, Paulin, Lars, Løvdal, Trond, Riedel, Christian U., Bar, Nadav, Borda, Daniela, Nicolau, Anca Ioana, Auvinen, Petri
Rok vydání: 2021
Předmět:
DOI: 10.6084/m9.figshare.13979207
Popis: Additional file 10: Figure S10. ddPCR / RNA-seq correlation for log2 fold change. The figure shows log2 fold-changes observed by ddPCR plotted against RNA-seq data for samples of ScottA obtained 10 min after treatment with 400 MPa. Transcripts levels of individual genes obtained by ddPCR were normalized to recG levels. Blue circles represent genes that were significantly differentially expressed in both ddPCR and RNA-seq results. White circles represent genes that were not significantly differentially expressed in both ddPCR and RNA-seq. The orange and blue gene names indicate significant up- and down regulation, respectively. The Pearson correlation coefficient between ddPCR and RNA-seq log2 fold change results was 0.97 (r=0.97).
Databáze: OpenAIRE