ShortBOL: A Language for Scripting Designs for Engineered Biological Systems Using Synthetic Biology Open Language (SBOL)
| Autor: | Anil Wipat, Lewis Grozinger, Jacob Beal, Bryan Bartley, Goksel Misirli, Angel Goñi-Moreno, Matthew Crowther, Matthew Pocock, Christopher P. D. Taylor, James Alastair McLaughlin |
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| Rok vydání: | 2020 |
| Předmět: |
0106 biological sciences
Communication design 0303 health sciences T1 Programming language Computer science Biomedical Engineering General Medicine computer.file_format Q1 computer.software_genre 01 natural sciences Biochemistry Genetics and Molecular Biology (miscellaneous) 03 medical and health sciences Synthetic biology Data exchange Scripting language 010608 biotechnology Humans Programming Languages Synthetic Biology RDF computer 030304 developmental biology |
| Zdroj: | ACS Synthetic Biology |
| ISSN: | 2161-5063 |
| DOI: | 10.1021/acssynbio.9b00470 |
| Popis: | The Synthetic Biology Open Language (SBOL) is an emerging synthetic biology data exchange standard, designed primarily for unambiguous and efficient machine-to-machine communication. However, manual editing of SBOL is generally difficult for non-trivial designs. Here, we describe ShortBOL, a light-weight SBOL scripting language that bridges the gap between manual editing, visual design tools, and direct programming. ShortBOL is a shorthand textual language developed to enable users to create SBOL designs quickly and easily, without requiring strong programming skills or visual design tools. |
| Databáze: | OpenAIRE |
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