Additional file 1: of Transcriptome analysis of root response to citrus blight based on the newly assembled Swingle citrumelo draft genome

Autor: Yunzeng Zhang, Barthe, Gary, Grosser, Jude, Wang, Nian
Rok vydání: 2016
DOI: 10.6084/m9.figshare.c.3627176_d1.v1
Popis: Supplementary figures 1 and 2, supplementary tables 1–4 and supplementary notes for genome assembly, annotation and phylogenetic tree construction. (Word, 1.2 Mb). Including Figure S1. The citrus phylogenetic tree constructed with SNP data from Swingle citrumelo (this study) and 8 citrus cultivars by SNPhylo (page 2); Figure S2. Analysis of citrus trees used for transcriptome analysis; Table S1. Differentially expressed genes related to ERFs and ABA pathways annotated by MapMan; Table S2. The qRT-PCR validation values for the 25 selected genes; Table S3. Primer sequences used to amplify the selected genes; Table S4. The NCBI accession no. for DNA and RNA reads as well as the draft assembly. (DOCX 1250 kb)
Databáze: OpenAIRE