| Autor: |
Zeller, Michael, Anderson, Tavis, Rasna Walia, Vincent, Amy, Gauger, Phillip |
| Rok vydání: |
2018 |
| DOI: |
10.6084/m9.figshare.7285958 |
| Popis: |
Figure S1. Reference tree used as a backbone for defining neuraminidase (NA) clades. Two distinct subtypes of NA are found in swine, N1 and N2. Clades of the N1 subtype found in swine include N1.Classical (red), N1.Pandemic (yellow), and N1.Human-Seasonal (orange). Clades of the N2 subtype found in swine include N2.1998 (green), N2.2002 (brown), and the N2.Human-seasonal (blue). The reference tree was built using FastTree2 v2.1.9 [32] to infer the best-known maximum-likelihood tree implementing a general time reversible model of nucleotide substitution with a CAT model of rate heterogeneity with branch lengths rescaled to optimize the Gamma20 likelihood. (PDF 9 kb) |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
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