Draft genome sequence of Paenibacillus sp. strain A2
| Autor: | Qing-feng Cui, Yi Shaojin, Han-ping Dong, Zhengliang Wang, Fan Zhang, Fuchang Shu, Beiwen Zheng, Jinshui Yang, Hao Dong, Zhongzhi Zhang, Lujun Chai, Yuehui She, Dujie Hou |
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| Rok vydání: | 2016 |
| Předmět: |
0301 basic medicine
Whole genome sequencing Genetics Genome biology 030106 microbiology Chromosome RNA Ribosomal RNA biology.organism_classification Short Genome Report Sulfonate biodegradation 03 medical and health sciences 030104 developmental biology Plasmid Hiseq2000 Paenibacillus sp. strain A2 Gene Bacteria |
| Zdroj: | Standards in Genomic Sciences |
| ISSN: | 1944-3277 |
| DOI: | 10.1186/s40793-015-0125-7 |
| Popis: | Paenibacillus sp. strain A2 is a Gram-negative rod-shaped bacterium isolated from a mixture of formation water and petroleum in Daqing oilfield, China. This facultative aerobic bacterium was found to have a broad capacity for metabolizing hydrocarbon and organosulfur compounds, which are the main reasons for the interest in sequencing its genome. Here we describe the features of Paenibacillus sp. strain A2, together with the genome sequence and its annotation. The 7,650,246 bp long genome (1 chromosome but no plasmid) exhibits a G+C content of 54.2 % and contains 7575 protein-coding and 49 RNA genes, including 3 rRNA genes. One putative alkane monooxygenase, one putative alkanesulfonate monooxygenase, one putative alkanesulfonate transporter and four putative sulfate transporters were found in the draft genome. |
| Databáze: | OpenAIRE |
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