Additional file 1 of DNA methylation changes during preimplantation development reveal inter-species differences and reprogramming events at imprinted genes

Autor: Ivanova, Elena, Canovas, Sebastian, Garcia-Martínez, Soledad, Romar, Raquel, Lopes, Jordana S., Rizos, Dimitrios, Sanchez-Calabuig, Maria J., Krueger, Felix, Andrews, Simon, Perez-Sanz, Fernando, Kelsey, Gavin, Coy, Pilar
Rok vydání: 2020
Předmět:
DOI: 10.6084/m9.figshare.12284930.v1
Popis: Additional file 1: Supplementary Table 1. Sequencing outputs for (a) PBAT or scBS-seq libraries from bovine samples; and (b) PBAT libraries from porcine samples. Supplementary Table 2. Sequencing output for RNA-seq libraries from porcine and bovine samples. Supplementary Table 3. 100-CpG tiles losing or gaining methylation between the 2-4 and 8-6 cell stages, filtering for tiles changing by >10%. Supplementary Table 4. Location of candidate gDMRs with respect to bovine imprinted genes identified by RNA-seq [9]. Supplementary Table 5. Promoter methylation and CpG coverage of DNMT, TET and related genes in pig and cow PBAT/scBS-seq datasets. Supplementary Table 6. Lists of pig and cow pluripotency and zygotic genome activation genes.
Databáze: OpenAIRE