Protein structure topological comparison, discovery and matching service
| Autor: | gilleain torrance, D. W. Westhead, David Gilbert, Ioannis Michalopoulos |
|---|---|
| Rok vydání: | 2005 |
| Předmět: |
Statistics and Probability
Models Molecular Protein Folding Theoretical computer science Matching (graph theory) Computer science Sequence analysis Protein Conformation computer.software_genre Biochemistry Computer graphics User-Computer Interface Software Protein structure Protein methods Sequence Analysis Protein Computer Graphics Computer Simulation Molecular Biology Internet Information retrieval business.industry Proteins Graph Computer Science Applications Visualization Computational Mathematics Computational Theory and Mathematics Models Chemical Graph (abstract data type) The Internet Protein folding Web service business computer Sequence Alignment Algorithms |
| Zdroj: | Bioinformatics (Oxford, England). 21(10) |
| ISSN: | 1367-4803 |
| Popis: | Summary: We describe a fold level fast protein comparison and motif matching facility based on the TOPS representation of structure. This provides an update to a previous service at the EBI, with a better graph matching with faster results and visualization of both the structures being compared against and the common pattern of each with the target domain. Availability: Web service at http://balabio.dcs.gla.ac.uk/tops or via the main TOPS site at http://www.tops.leeds.ac.uk. Software is also available for download from these sites. Contact: tops@brc.dcs.gla.ac.uk |
| Databáze: | OpenAIRE |
| Externí odkaz: |
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