The complete mitochondrial genome of Trematomus loennbergii (Perciformes, Nototheniidae)
| Autor: | Tae Eul Im, Sun Hee Kim, Young Min Chi, Euna Jo, Jeong-Hoon Kim, E. Choi, Seung Jae Lee, Hyun Park, Jinmu Kim |
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| Rok vydání: | 2021 |
| Předmět: |
PacBio
0106 biological sciences 0301 basic medicine Pagothenia borchgrevinki Genetics Mitochondrial DNA biology Phylogenetic tree Trematomus loennbergii Scaly rockcod biology.organism_classification 010603 evolutionary biology 01 natural sciences Stop codon 03 medical and health sciences 030104 developmental biology Mitochondrial genome Start codon Molecular evolution Nototheniidae Molecular Biology Gene Mitogenome Announcement Research Article |
| Zdroj: | Mitochondrial DNA. Part B, Resources article-version (VoR) Version of Record |
| ISSN: | 2380-2359 |
| DOI: | 10.1080/23802359.2021.1899070 |
| Popis: | The complete mitochondrial genome of Trematomus loennbergii was studied using NGS technology with PacBio platform. The mitochondrial genome size was 19,374bp and it had 13 protein-coding genes, 22 tRNAs and 2 rRNAs. There were 4 types of stop codons which were TAA, TAG, AGG and T(AA) but start codon type was only one (ATG). The contents of GC were 44.09% and AT contents were 55.91%. To conduct phylogenetic analysis, 12 species in 3 families were used. The result suggested that T. loennbergii was close to Pagothenia borchgrevinki in Nototheniidae. This study would provide a fundamental data for molecular evolution of T. loennbergii. |
| Databáze: | OpenAIRE |
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