Detection and molecular characterization of infectious bronchitis-like viruses in wild bird populations
| Autor: | Anna Jacukowicz, Zenon Minta, Katarzyna Domańska-Blicharz, Anna Lisowska, Krzysztof Wyrostek |
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| Rok vydání: | 2014 |
| Předmět: |
Charadriiformes
Infectious bronchitis virus Animals Wild medicine.disease_cause Genome Time Birds Food Animals medicine Animals Gene Phylogeny Coronavirus Genetics Galliformes General Immunology and Microbiology biology Phylogenetic tree Infectious bronchitis Bird Diseases biology.organism_classification Anseriformes Virology Population Surveillance RNA Viral Animal Science and Zoology Poland Coronavirus Infections |
| Zdroj: | Avian pathology : journal of the W.V.P.A. 43(5) |
| ISSN: | 1465-3338 |
| Popis: | We examined 884 wild birds mainly from the Anseriformes, Charadriiformes and Galliformes orders for infectious bronchitis (IBV)-like coronavirus in Poland between 2008 and 2011. Coronavirus was detected in 31 (3.5%) of the tested birds, with detection rates of 3.5% in Anseriformes and 2.3% in Charadriiformes and as high as 17.6% in Galliformes. From the 31 positive samples, only 10 gave positive results in molecular tests aimed at various IBV genome fragments: five samples were positive for the RdRp gene, four for gene 3, eight for gene N and eight for the 3'-untranslated region fragment. All analysed genome fragments of the coronavirus strains shared different evolutionary branches, resulting in a different phylogenetic tree topology. Most detected fragment genes seem to be IBV-like genes of the most frequently detected lineages of IBV in this geographical region (i.e. Massachusetts, 793B and QX). Two waves of coronavirus infections were identified: one in spring (April and May) and another in late autumn (October to December). To our knowledge this is the first report of the detection of different fragment IBV-like genes in wild bird populations. |
| Databáze: | OpenAIRE |
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