Activation of the IRE1 RNase through remodeling of the kinase front pocket by ATP-competitive ligands

Autor: Breanna Canter, Benjamin T. Walters, Alfred Lammens, Peter Liu, Avi Ashkenazi, Wilson Phung, Weiru Wang, Kevin R Clark, Adrien Le Thomas, Joachim Rudolph, Heidi J.A. Wallweber, Elena Ferri, Eric S. Day, Kyle Mortara, Maureen Beresini, Marie-Gabrielle Braun, Yung-Chia A. Chen, Susan Kaufman
Jazyk: angličtina
Rok vydání: 2020
Předmět:
Models
Molecular

0301 basic medicine
Protein Folding
Protein Conformation
RNase P
Science
Allosteric regulation
Endoribonuclease
General Physics and Astronomy
Kinases
Protein Serine-Threonine Kinases
Crystallography
X-Ray

Endoplasmic Reticulum
Ligands
Article
General Biochemistry
Genetics and Molecular Biology

Stress signalling
Gene Knockout Techniques
03 medical and health sciences
Adenosine Triphosphate
Ribonucleases
0302 clinical medicine
Protein structure
Endoribonucleases
Humans
Phosphorylation
Protein Kinase Inhibitors
X-ray crystallography
Multidisciplinary
Chemistry
Kinase
Endoplasmic reticulum
Small molecules
General Chemistry
Cell biology
030104 developmental biology
Protein kinase domain
030220 oncology & carcinogenesis
Unfolded Protein Response
Unfolded protein response
Protein Multimerization
Allosteric Site
Zdroj: Nature Communications, Vol 11, Iss 1, Pp 1-15 (2020)
Nature Communications
ISSN: 2041-1723
Popis: Inositol-Requiring Enzyme 1 (IRE1) is an essential component of the Unfolded Protein Response. IRE1 spans the endoplasmic reticulum membrane, comprising a sensory lumenal domain, and tandem kinase and endoribonuclease (RNase) cytoplasmic domains. Excess unfolded proteins in the ER lumen induce dimerization and oligomerization of IRE1, triggering kinase trans-autophosphorylation and RNase activation. Known ATP-competitive small-molecule IRE1 kinase inhibitors either allosterically disrupt or stabilize the active dimeric unit, accordingly inhibiting or stimulating RNase activity. Previous allosteric RNase activators display poor selectivity and/or weak cellular activity. In this study, we describe a class of ATP-competitive RNase activators possessing high selectivity and strong cellular activity. This class of activators binds IRE1 in the kinase front pocket, leading to a distinct conformation of the activation loop. Our findings reveal exquisitely precise interdomain regulation within IRE1, advancing the mechanistic understanding of this important enzyme and its investigation as a potential small-molecule therapeutic target.
The RNase activity of Inositol-Requiring Enzyme 1 (IRE1) can be allosterically regulated by ATP-competitive inhibitors of the IRE1 kinase domain. Here, the authors identify ATP-competitive IRE1 RNase activators with improved selectivity and cellular activity, and elucidate their mechanism of action.
Databáze: OpenAIRE