Molecular characterization and distribution of the needle nematode Longidorus laevicapitatus Williams, 1959 (Nematoda: Longidoridae) in Costa Rica
| Autor: | Juan E. Palomares-Rius, Antonio Archidona-Yuste, Walter Peraza-Padilla, Tatiana Zamora-Araya, Carolina Cantalapiedra-Navarrete, Pablo Castillo |
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| Přispěvatelé: | Universidad Nacional de Costa Rica |
| Jazyk: | angličtina |
| Rok vydání: | 2016 |
| Předmět: |
0106 biological sciences
ORNAMENTAL PLANTS PHYLOGENY BAYESIAN THEORY OF STATISTICAL DECISIONS Bayesian inference D2-D3 ITS1 ADN 010607 zoology 18S rDNA FILOGENIA Plant Science TAXONOMÍA VEGETAl Horticulture WILD PLANTS 01 natural sciences Intraspecific competition Phylogenetics 28S ribosomal RNA Botany COSTA RICA Longidorus Longidoridae Phylogeny PLANT PARASITOS NEMATODES PLANTAS SILVESTRES Taxonomy biology Phylogenetic tree DNA VEGETABLE TAXONOMY biology.organism_classification Longidorids Nematode TEORIA BAYESIANA DE DECISIONES ESTADISTICAS NEMATODOS PARÁSITOS DE PLANTAS Taxonomy (biology) PLANTAS ORNAMENTALES Agronomy and Crop Science 010606 plant biology & botany |
| Zdroj: | European Journal of Plant Pathology vol. 147 443–450 2017 Repositorio UNA Universidad Nacional de Costa Rica instacron:UNA Digital.CSIC. Repositorio Institucional del CSIC instname |
| Popis: | Correct identification of Longidorus species in Costa Rica is essential to establish appropriate control strategies for preventing the spread of these nematodes. Nematode surveys conducted in the rainy seasons from 2013 to 2015 in areas arbitrarily chosen and widely distributed in the whole territory of Costa Rica, resulted in an overall prevalence of Longidorus spp. infesting soils both cultivated, ornamental and wild plants of 40.26 %. Integrative morphometric and molecular data for Longidorus populations were obtained using D2-D3 expansion segments of 28S rRNA, ITS1-rRNA, and the partial 18S-rRNA, identifying a solely species identified as Longidorus laevicapitatus. Morphology and morphometrical traits analysis of these populations of L. laevicapitatus were in agreement with those of the original and posterior descriptions of the species, except for some minor differences, which may be a result of intraspecific variability. The phylogenetic relationships of this species with other representatives of Longidorus spp. using D2-D3 expansion segments and the partial 18S indicated that L. laevicapitatus clustered clearly separately in a basal position in both phylogenetic trees. Research was supported by grant of Universidad Nacional and FIDA (Fondo Institucional al Desarrollo Académico) from Costa Rica. |
| Databáze: | OpenAIRE |
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