Draft genome sequence of the extremely halophilic Halorubrum sp. SAH-A6 isolated from rock salts of the Danakil depression, Ethiopia
| Autor: | Dokyung Oh, Jung-Kue Shin, Kyounghee Park, Sang Jae Lee, Jae Hak Sohn, Han-Seung Lee, Mingyeong Woo, Ashagrie Gibtan, Dong Woo Lee |
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| Rok vydání: | 2016 |
| Předmět: |
0301 basic medicine
lcsh:QH426-470 030106 microbiology Biochemistry Genome 03 medical and health sciences Rock salts Genetics Gene Comparative genomics Whole genome sequencing Lab Resource biology Accession number (library science) biology.organism_classification Halophile Danakil depression lcsh:Genetics 030104 developmental biology Halorubrum sp. SAH-A6 Molecular Medicine Ethiopia Halorubrum Biotechnology Archaea |
| Zdroj: | Genomics Data, Vol 10, Iss C, Pp 30-32 (2016) Genomics Data |
| ISSN: | 2213-5960 |
| DOI: | 10.1016/j.gdata.2016.08.014 |
| Popis: | The draft genome sequence of Halorubrum sp. SAH-A6, isolated from commercial rock salts of the Danakil depression, Ethiopia. The genome comprised 3,325,770bp, with the G+C content of 68.0%. The strain has many genes which are responsible for secondary metabolites biosynthesis, transport and catabolism as compared to other Halorubrum archaea members. Abundant genes responsible for numerous transport systems, solute accumulation, and aromatic/sulfur decomposition were detected. The first genomic analysis encourages further research on comparative genomics, and biotechnological applications. The NCBI accession number for this genome is SAMN04278861 and ID: 4278861 and strain deposited with accession number KCTC 43215. |
| Databáze: | OpenAIRE |
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