Complete Genome Sequences of Eight Helicobacter pylori Strains with Different Virulence Factor Genotypes and Methylation Profiles, Isolated from Patients with Diverse Gastrointestinal Diseases on Okinawa Island, Japan, Determined Using PacBio Single-Molecule Real-Time Technology

Autor: Akihiro Sekine, Kuniko Teruya, Makiko Shimoji, Kazuma Nakano, Hinako Tamotsu, Yasunobu Terabayashi, Rumiko Suzuki, Misako Aoyama, Takashi Hirano, Kazuhito Satou, Akino Shiroma, Nagisa Kinjo, Ayaka Juan, Fukunori Kinjo, Yoshio Yamaoka, Morimi Teruya, Miyuki Matsuda
Jazyk: angličtina
Rok vydání: 2014
Předmět:
Zdroj: Genome Announcements
ISSN: 2169-8287
Popis: We report the complete genome sequences of eight Helicobacter pylori strains isolated from patients with gastrointestinal diseases in Okinawa, Japan. Whole-genome sequencing and DNA methylation detection were performed using the PacBio platform. De novo assembly determined a single, complete contig for each strain. Furthermore, methylation analysis identified virulence factor genotype-dependent motifs.
Databáze: OpenAIRE