Data on xylem sap proteins from Mn- and Fe-deficient tomato plants obtained using shotgun proteomics
| Autor: | Anunciación Abadía, Laura Ceballos-Laita, Daisuke Takahashi, Javier Abadía, Matsuo Uemura, Ana Flor López-Millán, Elain Gutierrez-Carbonell |
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| Přispěvatelé: | Ministerio de Economía y Competitividad (España), Gobierno de Aragón, Japan Society for the Promotion of Science, Consejo Superior de Investigaciones Científicas (España) |
| Jazyk: | angličtina |
| Rok vydání: | 2018 |
| Předmět: |
0301 basic medicine
Proteomics Shotgun lcsh:Computer applications to medicine. Medical informatics Tomato Mn deficiency 03 medical and health sciences Botany Shotgun proteomics Research article lcsh:Science (General) Xylem sap Proteomics and Biochemistry Multidisciplinary biology Iron deficiency fungi Xylem food and beverages biology.organism_classification 030104 developmental biology Principal component analysis lcsh:R858-859.7 Solanum Multivariate statistical lcsh:Q1-390 |
| Zdroj: | Digital.CSIC. Repositorio Institucional del CSIC instname Data in Brief, Vol 17, Iss, Pp 512-516 (2018) Data in Brief |
| Popis: | © 2018 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). This article contains consolidated proteomic data obtained from xylem sap collected from tomato plants grown in Fe- and Mn-sufficient control, as well as Fe-deficient and Mn-deficient conditions. Data presented here cover proteins identified and quantified by shotgun proteomics and Progenesis LC-MS analyses: proteins identified with at least two peptides and showing changes statistically significant (ANOVA; p ≤ 0.05) and above a biologically relevant selected threshold (fold ≥ 2) between treatments are listed. The comparison between Fe-deficient, Mn-deficient and control xylem sap samples using a multivariate statistical data analysis (Principal Component Analysis, PCA) is also included. Data included in this article are discussed in depth in the research article entitled “Effects of Fe and Mn deficiencies on the protein profiles of tomato (Solanum lycopersicum) xylem sap as revealed by shotgun analyses” [1]. This dataset is made available to support the cited study as well to extend analyses at a later stage. Supported by the Spanish Ministry of Economy and Competitiveness (MINECO; projects AGL2013-42175-R and AGL2016-75226-R, co-financed with FEDER), and the Aragón Government (Group A03). Research conducted in Iwate University was in part supported by Grants-in-Aid for Scientific Research (#24-7373, #22120003, and #24370018) from the Japan Society for the Promotion of Science. E.G.-C. was supported by a JAE Pre-CSIC Contract and L. C.-L was supported by a FPI-MINECO Contract. |
| Databáze: | OpenAIRE |
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