Additional file 1 of Genomic characterization of bacteria from the ultra-oligotrophic Madison aquifer: insight into the archetypical LuxI/LuxR and identification of novel LuxR solos

Autor: Wengert, Peter C., Wong, Narayan H., Barton, Hazel A., Gan, Han Ming, Hudson, André O., Savka, Michael A.
Rok vydání: 2021
DOI: 10.6084/m9.figshare.14561417.v1
Popis: Additional file 1. Detection and analysis of LuxI synthases. (A) 10kbp genetic region surrounding identified luxR homologs (red) having corresponding LuxI homologs (blue) in SD129 and SD340. (B) Interproscan output of a successfully validated luxI homolog. Each accession number corresponds to a detected protein domain. (C) Alignment of putative LuxI homologs with canonical LuxI homologs using clustalOmega. Residues highlighted in yellow are invariant sites in validated LuxI-type autoinducer synthases (Fuqua and Greenberg, 2002). Residues are numbered based on the sequence of TraI.
Databáze: OpenAIRE