The BioCyc collection of microbial genomes and metabolic pathways
| Autor: | Wai Kit Ong, Pallavi Subhraveti, Markus Krummenacker, Peter D. Karp, Suzanne M. Paley, Peter E. Midford, Quang Ong, Carol A. Fulcher, Ingrid M. Keseler, Mario Latendresse, Ron Caspi, Richard Billington, Anamika Kothari |
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| Rok vydání: | 2017 |
| Předmět: |
Paper
0301 basic medicine Internet 030102 biochemistry & molecular biology Microbial Genomes Computer science Computational Biology Genomics Computational biology Models Biological Genome Search Engine Genome Microbial 03 medical and health sciences ComputingMethodologies_PATTERNRECOGNITION 030104 developmental biology Databases Genetic Escherichia coli Analysis software Microbial genome Molecular Biology Metabolic Networks and Pathways Software Information Systems |
| Zdroj: | Briefings in Bioinformatics. 20:1085-1093 |
| ISSN: | 1477-4054 1467-5463 |
| Popis: | BioCyc.org is a microbial genome Web portal that combines thousands of genomes with additional information inferred by computer programs, imported from other databases and curated from the biomedical literature by biologist curators. BioCyc also provides an extensive range of query tools, visualization services and analysis software. Recent advances in BioCyc include an expansion in the content of BioCyc in terms of both the number of genomes and the types of information available for each genome; an expansion in the amount of curated content within BioCyc; and new developments in the BioCyc software tools including redesigned gene/protein pages and metabolite pages; new search tools; a new sequence-alignment tool; a new tool for visualizing groups of related metabolic pathways; and a facility called SmartTables, which enables biologists to perform analyses that previously would have required a programmer’s assistance. |
| Databáze: | OpenAIRE |
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