Complete genome sequence of the fish pathogen Aeromonas veronii TH0426 with potential application in biosynthesis of pullulanase and chitinase
| Autor: | Yuanhuan Kang, Aidong Qian, Xiaofeng Shan, Yang Xu, Chun-Feng Wang, Xiaoyi Pan, Shahrood Ahmed Siddiqui |
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| Rok vydání: | 2016 |
| Předmět: |
0301 basic medicine
Glycoside Hydrolases 030106 microbiology Bioengineering Aeromonas veronii Applied Microbiology and Biotechnology Genome Microbiology 03 medical and health sciences Animals Gene Catfishes Genetics Whole genome sequencing biology Pullulanase Base Sequence Chitinases General Medicine Sequence Analysis DNA biology.organism_classification 030104 developmental biology Chitinase biology.protein GC-content Genome Bacterial Biotechnology Catfish |
| Zdroj: | Journal of biotechnology. 227 |
| ISSN: | 1873-4863 |
| Popis: | Aeromonas veronii TH0426 is a pathogen of the farmed yellow catfish Pelteobagrus fulvidraco but shows high-level expression of pullulanase and chitinase. Here, we present its genome sequence, which is the first reported complete genome of fish pathogen in A. veronii to date. Strain TH0426 harbors a single circular 4,923,009bp chromosome with a GC content of 58.25%. There are 4525 genes identified on its genome, including 4244 protein-coding genes, 32 rRNA genes, 120 tRNA genes, a noncoding RNA and 128 pseudo genes. We believe that the genomic information of A. veronii TH0426 would facilitate to reveal its pathogenic mechanism associated with yellow catfish, develop vaccine to decrease economic losses for fish farming, meanwhile explore the potential application in producing pullulanase and chitinase. |
| Databáze: | OpenAIRE |
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