Homodimerization of a glycoside hydrolase family GH1 β-glucosidase suggests distinct activity of enzyme different states

Autor: Sandro R. Marana, Vitor Medeiros Almeida, Rafael Siqueira Chagas, Felipe Akihiro Melo Otsuka
Rok vydání: 2020
Předmět:
Zdroj: Protein Sci
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
ISSN: 1469-896X
Popis: In this work, we investigated how activity and oligomeric state are related in a purified GH1 β‐glucosidase from Spodoptera frugiperda (Sfβgly). Gel filtration chromatography coupled to a multiple angle light scattering detector allowed separation of the homodimer and monomer states and determination of the dimer dissociation constant (K (D)), which was in the micromolar range. Enzyme kinetic parameters showed that the dimer is on average 2.5‐fold more active. Later, we evaluated the kinetics of homodimerization, scanning the changes in the Sfβgly intrinsic fluorescence over time when the dimer dissociates into the monomer after a large dilution. We described how the rate constant of monomerization (k (off)) is affected by temperature, revealing the enthalpic and entropic contributions to the process. We also evaluated how the rate constant (k (obs)) by which equilibrium is reached after dimer dilution behaves when varying the initial Sfβgly concentration. These data indicated that Sfβgly dimerizes through the conformational selection mechanism, in which the monomer undergoes a conformational exchange and then binds to a similar monomer, forming a more active homodimer. Finally, we noted that conformational selection reports and experiments usually rely on a ligand whose concentration is in excess, but for homodimerization, this approach does not hold. Hence, since our approach overcomes this limitation, this study not only is a new contribution to the comprehension of GH1 β‐glucosidases, but it can also help to elucidate protein interaction pathways.
Databáze: OpenAIRE
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