EcoliWiki: a wiki-based community resource for Escherichia coli
| Autor: | Nathan M. Liles, James C. Hu, Lili Niu, Daniel P. Renfro, B. K. McIntosh, Gwendowlyn S. Knapp, Chanchala R. Lairikyengbam, Adrienne E. Zweifel, Deborah A. Siegele, Amanda M. Supak, Anand Venkatraman |
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| Rok vydání: | 2011 |
| Předmět: |
Resource (biology)
ved/biology.organism_classification_rank.species Biology medicine.disease_cause Coliphages Genome World Wide Web 03 medical and health sciences Annotation Databases Genetic Escherichia coli Genetics medicine Model organism 030304 developmental biology Internet 0303 health sciences business.industry ved/biology 030302 biochemistry & molecular biology Software development Molecular Sequence Annotation Articles Interspersed Repetitive Sequences Systems Integration Genes Bacterial Mobile genetic elements business Software Plasmids |
| Zdroj: | Nucleic Acids Research |
| ISSN: | 1362-4962 0305-1048 |
| DOI: | 10.1093/nar/gkr880 |
| Popis: | EcoliWiki is the community annotation component of the PortEco (http://porteco.org; formerly EcoliHub) project, an online data resource that integrates information on laboratory strains of Escherichia coli, its phages, plasmids and mobile genetic elements. As one of the early adopters of the wiki approach to model organism databases, EcoliWiki was designed to not only facilitate community-driven sharing of biological knowledge about E. coli as a model organism, but also to be interoperable with other data resources. EcoliWiki content currently covers genes from five laboratory E. coli strains, 21 bacteriophage genomes, F plasmid and eight transposons. EcoliWiki integrates the Mediawiki wiki platform with other open-source software tools and in-house software development to extend how wikis can be used for model organism databases. EcoliWiki can be accessed online at http://ecoliwiki.net. |
| Databáze: | OpenAIRE |
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